RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 AMPD2Q01433 879 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 TNFAIP2Q03169 654 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 LRRC14Q15048 493 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 PCBP1Q15365 356 aaKnown RBP eCLIP4.8□□□□□ -1.64
ABCD3-205ENST00000484213 SLC9C2Q5TAH2 1124 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 MFSD6Q6ZSS7 791 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 DEFB123Q8N688 67 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 LRRN4CLQ8ND94 238 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 TIFAQ96CG3 184 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 TMEM39BQ9GZU3 492 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 RBM28Q9NW13 759 aaKnown RBP4.8□□□□□ -1.64
ABCD3-205ENST00000484213 PAG1Q9NWQ8 432 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 FAM8A1Q9UBU6 413 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 RAB23Q9ULC3 237 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 SLX4Q8IY92 1834 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 ZNF536O15090 1300 aa4.8□□□□□ -1.64
ABCD3-205ENST00000484213 LRRC37AA6NMS7 1700 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 KRT17Q04695 432 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 PRKCZQ05513 592 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 HDAC1Q13547 482 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 TMEM67Q5HYA8 995 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 WIPI1Q5MNZ9 446 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 CDKAL1Q5VV42 579 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 FIGNL1Q6PIW4 674 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 UBE2R2Q712K3 238 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 C7orf31Q8N865 590 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 GPR20Q99678 358 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 DPH2Q9BQC3 489 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 TINF2Q9BSI4 451 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SENP6Q9GZR1 1112 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 LIN7BQ9HAP6 207 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 DZANK1Q9NVP4 752 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 PCDHB10Q9UN67 800 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 BRCA1P38398 1863 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 RLBP1P12271 317 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 FGFR2P21802 821 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 MECOMQ03112 1051 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 UBE3AQ05086 875 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 FXNQ16595 210 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 FAM47CQ5HY64 1035 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SH3PXD2AQ5TCZ1 1133 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SLFN13Q68D06 897 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 Q6ZNB5 142 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 ABI1Q8IZP0 508 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 GMCL1P1Q8NEA9 526 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 HNRNPLLQ8WVV9 542 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 IER2Q9BTL4 223 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 C11orf84Q9BUA3 381 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 AMNQ9BXJ7 453 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 PAK6Q9NQU5 681 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SAP30BPQ9UHR5 308 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 A0A1W2PNR3 127 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 TTLL8A6PVC2 850 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 GOLGA8BA8MQT2 603 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 TREHO43280 583 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 BAG4O95429 457 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 POTEIP0CG38 1075 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 POTEJP0CG39 1038 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 MYBL2P10244 700 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 FGFR3P22607 806 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SH3BP2P78314 561 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 GUCY1A3Q02108 690 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 HOMER1Q86YM7 354 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 WFDC8Q8IUA0 241 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 MAFAQ8NHW3 353 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SP7Q8TDD2 431 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 TSR2Q969E8 191 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SHDQ96IW2 340 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 MAGEB10Q96LZ2 347 aaPredicted RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 MRPS17Q9Y2R5 130 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 METTL12A8MUP2 240 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 H0YCG3 227 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 COL6A1P12109 1028 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 CD33P20138 364 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 IRS1P35568 1242 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 GRB14Q14449 540 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 DGKDQ16760 1214 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 TMEM31Q5JXX7 168 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 IER5Q5VY09 327 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 APOBEC3HQ6NTF7 200 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 KIAA1211LQ6NV74 962 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 NFRKBQ6P4R8 1299 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SSH3Q8TE77 659 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 DDX1Q92499 740 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 PAWRQ96IZ0 340 aaKnown RBP4.79□□□□□ -1.64
ABCD3-205ENST00000484213 PLVAPQ9BX97 442 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 GPSM3Q9Y4H4 160 aa4.79□□□□□ -1.64
ABCD3-205ENST00000484213 SBF1O95248 1867 aa4.78□□□□□ -1.64
ABCD3-205ENST00000484213 H0YGN5 161 aa4.78□□□□□ -1.64
ABCD3-205ENST00000484213 IL33O95760 270 aa4.78□□□□□ -1.64
ABCD3-205ENST00000484213 ADH1AP07327 375 aa4.78□□□□□ -1.64
ABCD3-205ENST00000484213 PARP1P09874 1014 aaKnown RBP4.78□□□□□ -1.64
ABCD3-205ENST00000484213 SMARCA1P28370 1054 aa4.78□□□□□ -1.64
ABCD3-205ENST00000484213 EIF4A3P38919 411 aaKnown RBP4.78□□□□□ -1.64
ABCD3-205ENST00000484213 SMTNP53814 917 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms