RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CCDC50Q8IVM0 306 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 CHMP6Q96FZ7 201 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 EPB41L4BQ9H329 900 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 SLITRK6Q9H5Y7 841 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 NENFQ9UMX5 172 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 MRPL12P52815 198 aaKnown RBP21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 RPS8P62241 208 aaKnown RBP21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 TLDC1Q6P9B6 456 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 SLC51AQ86UW1 340 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 ZNF317Q96PQ6 595 aaPredicted RBP21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 EYA3Q99504 573 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 SNED1Q8TER0 1413 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 LOC102724428A0A0B4J2F2 783 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 ECM2O94769 699 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 EPS15P42566 896 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 SIK1P57059 783 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 HERC4Q5GLZ8 1057 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 ARMC9Q7Z3E5 817 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 NT5DC3Q86UY8 548 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 ZC3H3Q8IXZ2 948 aaKnown RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 SPAG5Q96R06 1193 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 FAM129AQ9BZQ8 928 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 EMILIN3Q9NT22 766 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 FRMPD2Q68DX3 1309 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 CCT8L1PA6NM43 557 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 CTNND1O60716 968 aaKnown RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 PPFIA2O75334 1257 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 TRIM37O94972 964 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 GHRP10912 638 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 HOXA7P31268 230 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 CDK8P49336 464 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 IFI16Q16666 785 aaKnown RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 BICDL1Q6ZP65 573 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 CEP95Q96GE4 821 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 SUCLA2Q9P2R7 463 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 HDAC9Q9UKV0 1011 aa21.53■■□□□ 1.04
RPUSD3-216ENST00000484134 PON1P27169 355 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 TNNI2P48788 182 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 SEPT2Q15019 361 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 CCDC26Q8TAB7 109 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 RIOX1Q9H6W3 641 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 COPB2P35606 906 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 NT5C2P49902 561 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 ADCY7P51828 1080 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 CASP5P51878 434 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 IFFO1Q0D2I5 559 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 UBE2SQ16763 222 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 ACCSLQ4AC99 568 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 ACSBG1Q96GR2 724 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 ADAM7Q9H2U9 754 aa21.52■■□□□ 1.04
RPUSD3-216ENST00000484134 EZRP15311 586 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 CHN1P15882 459 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 HIBCHQ6NVY1 386 aaPredicted RBP21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 DAAM2Q86T65 1068 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 KIRREL3Q8IZU9 778 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 BANK1Q8NDB2 785 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 NEDD1Q8NHV4 660 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 P3H4Q92791 437 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 CENPTQ96BT3 561 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 HES6Q96HZ4 224 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 FAM114A2Q9NRY5 505 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 KIAA1024Q9UPX6 916 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 UTP11Q9Y3A2 253 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 MAST2Q6P0Q8 1798 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 DDX3XO00571 662 aaKnown RBP eCLIP21.51■■□□□ 1.032e-8■■■□□ 18.5
RPUSD3-216ENST00000484134 ATP6V1G2O95670 118 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 FGGP02679 453 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 GCFC2P16383 781 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 NR2F2P24468 414 aa21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 CNOT10Q9H9A5 744 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 BZW2Q9Y6E2 419 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-216ENST00000484134 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 PLA2G4BP0C869 781 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 SPTY2D1Q68D10 685 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 GJB7Q6PEY0 223 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 CCDC65Q8IXS2 484 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 CCDC197Q8NCU1 140 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 ATXN2LQ8WWM7 1075 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 FMO2Q99518 471 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 NOD2Q9HC29 1040 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 BMP2KQ9NSY1 1161 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 SLAIN2Q9P270 581 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 SWAP70Q9UH65 585 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 CETN3O15182 167 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 PPP1R12BO60237 982 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 H2AFZP0C0S5 128 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 SMARCA1P28370 1054 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 PRKCIP41743 596 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 PPP1R7Q15435 360 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 UBAP2Q5T6F2 1119 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 DCAF12L1Q5VU92 463 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 SMIM5Q71RC9 77 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 H2AFVQ71UI9 128 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 ADAT2Q7Z6V5 191 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 GPBP1Q86WP2 473 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 CCDC24Q8N4L8 307 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 TBC1D31Q96DN5 1066 aa21.5■■□□□ 1.03
RPUSD3-216ENST00000484134 ATP6V0A4Q9HBG4 840 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms