RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CRIPAKQ8N1N5 446 aa20.53■□□□□ 0.88
ATG4B-221ENST00000483778 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.53■□□□□ 0.88
ATG4B-221ENST00000483778 RASGRP4Q8TDF6 673 aa20.53■□□□□ 0.88
ATG4B-221ENST00000483778 EPHX3Q9H6B9 360 aa20.53■□□□□ 0.88
ATG4B-221ENST00000483778 RC3H2Q9HBD1 1191 aaKnown RBP20.53■□□□□ 0.88
ATG4B-221ENST00000483778 POTEB3A0JP26 581 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 hCG_1984214I3L0E3 225 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 CYP3A4P08684 503 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 COL9A1P20849 921 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 KLRC1P26715 233 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 RCAN1P53805 252 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 AP3B2Q13367 1082 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 BLOC1S2Q6QNY1 142 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 POTEBQ6S5H4 581 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 MTHFD1LQ6UB35 978 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 NIPA1Q7RTP0 329 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 CCDC60Q8IWA6 550 aaPredicted RBP20.52■□□□□ 0.88
ATG4B-221ENST00000483778 FIBCD1Q8N539 461 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 ZNF713Q8N859 430 aaPredicted RBP20.52■□□□□ 0.88
ATG4B-221ENST00000483778 ZNF689Q96CS4 500 aaPredicted RBP20.52■□□□□ 0.88
ATG4B-221ENST00000483778 ZMYND12Q9H0C1 365 aa20.52■□□□□ 0.88
ATG4B-221ENST00000483778 ZBTB42B2RXF5 422 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 GRM6O15303 877 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 PRPF3O43395 683 aaKnown RBP20.51■□□□□ 0.87
ATG4B-221ENST00000483778 KCNA5P22460 613 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 RPS6KB1P23443 525 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 TMEM266Q2M3C6 531 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 TCEAL5Q5H9L2 206 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 SWSAP1Q6NVH7 229 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 SAMD11Q96NU1 681 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 AGXT2Q9BYV1 514 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 CELF4Q9BZC1 486 aaKnown RBP20.51■□□□□ 0.87
ATG4B-221ENST00000483778 TMX1Q9H3N1 280 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 NCOA5Q9HCD5 579 aaKnown RBP20.51■□□□□ 0.87
ATG4B-221ENST00000483778 PADI3Q9ULW8 664 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 TRPV2Q9Y5S1 764 aa20.51■□□□□ 0.87
ATG4B-221ENST00000483778 FNDC1Q4ZHG4 1894 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-221ENST00000483778 IPO5O00410 1097 aaKnown RBP20.5■□□□□ 0.87
ATG4B-221ENST00000483778 DGKIO75912 1065 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 BMPR1AP36894 532 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 GATMP50440 423 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 CCT2P78371 535 aaKnown RBP20.5■□□□□ 0.87
ATG4B-221ENST00000483778 IER5Q5VY09 327 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 TEX2Q8IWB9 1127 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 KIAA0319LQ8IZA0 1049 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 BANK1Q8NDB2 785 aa20.5■□□□□ 0.87
ATG4B-221ENST00000483778 LARP6Q9BRS8 491 aaKnown RBP20.5■□□□□ 0.87
ATG4B-221ENST00000483778 NID2Q14112 1375 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 ESYT2A0FGR8 921 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 BACH1O14867 736 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
ATG4B-221ENST00000483778 CTNNB1P35222 781 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 LEXMQ3ZCV2 418 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 TRMT1LQ7Z2T5 733 aaKnown RBP20.49■□□□□ 0.87
ATG4B-221ENST00000483778 FBXL16Q8N461 479 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 GLT8D2Q9H1C3 349 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 ADGRA3Q8IWK6 1321 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 IGSF9BQ9UPX0 1349 aa20.49■□□□□ 0.87
ATG4B-221ENST00000483778 C5orf42Q9H799 3197 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 PLXNA4Q9HCM2 1894 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 CCDC196A0A1B0GTZ2 297 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 SMIM35A0A1B0GVV1 85 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 H3BQ06 376 aaPredicted RBP20.48■□□□□ 0.87
ATG4B-221ENST00000483778 MGEA5O60502 916 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 KRT76Q01546 638 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 PDXDC2PQ6P474 469 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 ATP8B4Q8TF62 1192 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 TMEM40Q8WWA1 233 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 CLP1Q92989 425 aaKnown RBP20.48■□□□□ 0.87
ATG4B-221ENST00000483778 ZNF302Q9NR11 478 aa20.48■□□□□ 0.87
ATG4B-221ENST00000483778 C5orf67F2Z3F1 127 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 HBP1O60381 514 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 IL9P15248 144 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 CAMK1Q14012 370 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 TOB2Q14106 344 aaPredicted RBP20.47■□□□□ 0.87
ATG4B-221ENST00000483778 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
ATG4B-221ENST00000483778 PTPROQ16827 1216 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 REXO1Q8N1G1 1221 aaKnown RBP20.47■□□□□ 0.87
ATG4B-221ENST00000483778 GJA10Q969M2 543 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 LENG9Q96B70 501 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 PPP1R16BQ96T49 567 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 ZNF577Q9BSK1 485 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 SLC26A6Q9BXS9 759 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 C6orf50Q9HD87 102 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 ALG13Q9NP73 1137 aaKnown RBP20.47■□□□□ 0.87
ATG4B-221ENST00000483778 VPS54Q9P1Q0 977 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 GINS2Q9Y248 185 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 NOC2LQ9Y3T9 749 aaKnown RBP20.47■□□□□ 0.87
ATG4B-221ENST00000483778 MRPL42Q9Y6G3 142 aaKnown RBP20.47■□□□□ 0.87
ATG4B-221ENST00000483778 SQORQ9Y6N5 450 aa20.47■□□□□ 0.87
ATG4B-221ENST00000483778 CSPG5O95196 566 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 IBSPP21815 317 aaPredicted RBP20.46■□□□□ 0.87
ATG4B-221ENST00000483778 DNAJB1P25685 340 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 GTF2F1P35269 517 aaKnown RBP eCLIP20.46■□□□□ 0.872e-8■■■■■ 34.1
ATG4B-221ENST00000483778 EVCP57679 992 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 PAN2Q504Q3 1202 aaKnown RBP20.46■□□□□ 0.87
ATG4B-221ENST00000483778 PRR16Q569H4 304 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 FAM160B1Q5W0V3 765 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 NME8Q8N427 588 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms