RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 RRADP55042 308 aa6.5□□□□□ -1.37
COMMD3-213ENST00000483684 HSP90AA2PQ14568 343 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-213ENST00000483684 IFNL3Q8IZI9 196 aa6.5□□□□□ -1.37
COMMD3-213ENST00000483684 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.5□□□□□ -1.376e-6■■■□□ 15.1
COMMD3-213ENST00000483684 NEU4Q8WWR8 484 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-213ENST00000483684 SGSM3Q96HU1 749 aa6.5□□□□□ -1.37
COMMD3-213ENST00000483684 PLEKHG4BQ96PX9 1271 aa6.5□□□□□ -1.37
COMMD3-213ENST00000483684 ZDHHC5Q9C0B5 715 aa6.5□□□□□ -1.37
COMMD3-213ENST00000483684 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-213ENST00000483684 NR2E1Q9Y466 385 aa6.5□□□□□ -1.37
COMMD3-213ENST00000483684 FAM47E-STBD1D6RA91 191 aa6.49□□□□□ -1.37
COMMD3-213ENST00000483684 ARHGAP6O43182 974 aa6.49□□□□□ -1.37
COMMD3-213ENST00000483684 FGFR1P11362 822 aa6.49□□□□□ -1.37
COMMD3-213ENST00000483684 RPS19P39019 145 aaKnown RBP6.49□□□□□ -1.37
COMMD3-213ENST00000483684 NANOS3P60323 173 aaKnown RBP6.49□□□□□ -1.37
COMMD3-213ENST00000483684 FOXL1Q12952 345 aa6.49□□□□□ -1.37
COMMD3-213ENST00000483684 CD244Q9BZW8 370 aa6.49□□□□□ -1.37
COMMD3-213ENST00000483684 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
COMMD3-213ENST00000483684 PCSK5Q92824 1860 aa6.48□□□□□ -1.37
COMMD3-213ENST00000483684 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.48□□□□□ -1.37
COMMD3-213ENST00000483684 TUBA3CQ13748 450 aa6.48□□□□□ -1.37
COMMD3-213ENST00000483684 TUBA3EQ6PEY2 450 aa6.48□□□□□ -1.37
COMMD3-213ENST00000483684 PCSK4Q6UW60 755 aa6.48□□□□□ -1.37
COMMD3-213ENST00000483684 LARP4Q71RC2 724 aaKnown RBP eCLIP6.48□□□□□ -1.37
COMMD3-213ENST00000483684 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
COMMD3-213ENST00000483684 LARP4BQ92615 738 aaKnown RBP6.48□□□□□ -1.37
COMMD3-213ENST00000483684 OSBP2Q969R2 916 aa6.48□□□□□ -1.37
COMMD3-213ENST00000483684 AARSD1Q9BTE6 412 aaKnown RBP6.48□□□□□ -1.37
COMMD3-213ENST00000483684 ARHGEF4Q9NR80 690 aa6.48□□□□□ -1.37
COMMD3-213ENST00000483684 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 FAM90A27PA6NNH2 459 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 PRODHO43272 600 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 IL13RA1P78552 427 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
COMMD3-213ENST00000483684 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
COMMD3-213ENST00000483684 ARMC5Q96C12 935 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 HIRIP3Q9BW71 556 aaPredicted RBP6.47□□□□□ -1.37
COMMD3-213ENST00000483684 MMRN2Q9H8L6 949 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 TLR9Q9NR96 1032 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 PLA2G3Q9NZ20 509 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 PUF60Q9UHX1 559 aaKnown RBP6.47□□□□□ -1.37
COMMD3-213ENST00000483684 MSRB2Q9Y3D2 182 aa6.47□□□□□ -1.37
COMMD3-213ENST00000483684 PABPC1P11940 636 aaKnown RBP6.46□□□□□ -1.38
COMMD3-213ENST00000483684 PTPN1P18031 435 aaKnown RBP6.46□□□□□ -1.38
COMMD3-213ENST00000483684 SF3A1Q15459 793 aaKnown RBP6.46□□□□□ -1.38
COMMD3-213ENST00000483684 STILQ15468 1287 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 NBPF6Q5VWK0 638 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 USP30Q70CQ3 517 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 ASXL2Q76L83 1435 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 NBPF4Q96M43 638 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 C12orf65Q9H3J6 166 aaKnown RBP6.46□□□□□ -1.38
COMMD3-213ENST00000483684 AURKAIP1Q9NWT8 199 aaPredicted RBP6.46□□□□□ -1.38
COMMD3-213ENST00000483684 CEP72Q9P209 647 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 FBXO10Q9UK96 956 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 SRPK3Q9UPE1 567 aa6.46□□□□□ -1.38
COMMD3-213ENST00000483684 BLACEA4D250 179 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 PDPK1O15530 556 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 HIBADHP31937 336 aaKnown RBP6.45□□□□□ -1.38
COMMD3-213ENST00000483684 MSX2P35548 267 aaPredicted RBP6.45□□□□□ -1.38
COMMD3-213ENST00000483684 RBL2Q08999 1139 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 EIF4HQ15056 248 aaKnown RBP6.45□□□□□ -1.38
COMMD3-213ENST00000483684 WDR72Q3MJ13 1102 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 TRIM68Q6AZZ1 485 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 SPATC1Q76KD6 591 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 NLGN4XQ8N0W4 816 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 WNK4Q96J92 1243 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 KIAA1683Q9H0B3 1180 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 SIRPGQ9P1W8 387 aa6.45□□□□□ -1.38
COMMD3-213ENST00000483684 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 WNT9AO14904 365 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 HMGCRP04035 888 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 ADH4P08319 380 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 PTGS1P23219 599 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 KCNQ1P51787 676 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 SERINC3Q13530 473 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 NSMFQ6X4W1 530 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 ZNF627Q7L945 461 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 ZNF483Q8TF39 744 aaPredicted RBP6.44□□□□□ -1.38
COMMD3-213ENST00000483684 NELFAQ9H3P2 528 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 INCENPQ9NQS7 918 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 GALNT8Q9NY28 637 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 ARHGAP28Q9P2N2 729 aa6.44□□□□□ -1.38
COMMD3-213ENST00000483684 MAKP20794 623 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 RASGRF1Q13972 1273 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 DNAJC10Q8IXB1 793 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 PMFBP1Q8TBY8 1022 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 SREK1Q8WXA9 508 aaKnown RBP6.43□□□□□ -1.38
COMMD3-213ENST00000483684 AGAP2Q99490 1192 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 ALG1Q9BT22 464 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 CCDC113Q9H0I3 377 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 RIC8BQ9NVN3 520 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 BTBD7Q9P203 1132 aa6.43□□□□□ -1.38
COMMD3-213ENST00000483684 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
COMMD3-213ENST00000483684 PMS2P1A4D2B8 440 aa6.42□□□□□ -1.38
COMMD3-213ENST00000483684 MAN2B1O00754 1011 aa6.42□□□□□ -1.38
COMMD3-213ENST00000483684 AMY2AP04746 511 aa6.42□□□□□ -1.38
COMMD3-213ENST00000483684 AMY2BP19961 511 aa6.42□□□□□ -1.38
COMMD3-213ENST00000483684 AOAHP28039 575 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms