RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 STYK1Q6J9G0 422 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 PRR5LQ6MZQ0 368 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 ZC3H14Q6PJT7 736 aaKnown RBP4.84□□□□□ -1.63
LRCH3-217ENST00000483442 UNC5AQ6ZN44 842 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 PRRT2Q7Z6L0 340 aaPredicted RBP4.84□□□□□ -1.63
LRCH3-217ENST00000483442 SAPCD2Q86UD0 394 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 GPC2Q8N158 579 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 SYNE4Q8N205 404 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 TMEM87AQ8NBN3 555 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 JDP2Q8WYK2 163 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 GCC1Q96CN9 775 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 MASTLQ96GX5 879 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 MCMBPQ9BTE3 642 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 SRRTQ9BXP5 876 aaKnown RBP4.84□□□□□ -1.63
LRCH3-217ENST00000483442 BCAS3Q9H6U6 928 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF408Q9H9D4 720 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 PPT2Q9UMR5 302 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 ZBTB1Q9Y2K1 713 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 PCDHGB7Q9Y5F8 929 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 MYH14Q7Z406 1995 aaKnown RBP4.84□□□□□ -1.64
LRCH3-217ENST00000483442 PDE4DIPQ5VU43 2346 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 ZC3H12DA2A288 527 aaKnown RBP4.83□□□□□ -1.64
LRCH3-217ENST00000483442 PPP1R11O60927 126 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-217ENST00000483442 ENDOUP21128 410 aaKnown RBP4.83□□□□□ -1.64
LRCH3-217ENST00000483442 EIF6P56537 245 aaKnown RBP4.83□□□□□ -1.64
LRCH3-217ENST00000483442 DLX2Q07687 328 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-217ENST00000483442 EIF4A2Q14240 407 aaKnown RBP4.83□□□□□ -1.64
LRCH3-217ENST00000483442 AMOTQ4VCS5 1084 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 HLA-DQA1Q5Y7H0 255 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 SP8Q8IXZ3 490 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 RTKN2Q8IZC4 609 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 FIBCD1Q8N539 461 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 NAT16Q8N8M0 369 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 DHRS1Q96LJ7 313 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 POLKQ9UBT6 870 aa4.83□□□□□ -1.64
LRCH3-217ENST00000483442 COL15A1P39059 1388 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 KIF24Q5T7B8 1368 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 A0A087WZG4 1122 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 SRGAP3O43295 1099 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 CBFA2T2O43439 604 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 CELA3BP08861 270 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 IARSP41252 1262 aaKnown RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 MFAP1P55081 439 aaKnown RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 RACK1P63244 317 aaKnown RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 ST5P78524 1137 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 PRR5P85299 388 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 FOXO4P98177 505 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 TMEM62Q0P6H9 643 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 NR1I3Q14994 352 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 RTP5Q14D33 572 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 BICRALQ6AI39 1079 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 PAQR3Q6TCH7 311 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 USP50Q70EL3 339 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 LSRQ86X29 649 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 JAMLQ86YT9 394 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 TAB3Q8N5C8 712 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 CNBD1Q8NA66 436 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 FNIP1Q8TF40 1166 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 PTCHD1Q96NR3 888 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 TESK2Q96S53 571 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 BACH2Q9BYV9 841 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 GLIS2Q9BZE0 524 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 NOL6Q9H6R4 1146 aaKnown RBP4.82□□□□□ -1.64
LRCH3-217ENST00000483442 RNF186Q9NXI6 227 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 FHOD1Q9Y613 1164 aa4.82□□□□□ -1.64
LRCH3-217ENST00000483442 TIAM2Q8IVF5 1701 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 A0A1W2PQ27 194 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 A0A1W2PQ64 194 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 A0A1W2PQC6 194 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 A0A1W2PQD8 194 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 F8W031 263 aaPredicted RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 STARD3NLO95772 234 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 CYBBP04839 570 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 CD3EP07766 207 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 NPR1P16066 1061 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 EIF5P55010 431 aaKnown RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 FANCCQ00597 558 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 KIF23Q02241 960 aaPredicted RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 NOGQ13253 232 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 NOL9Q5SY16 702 aaKnown RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 CWF19L1Q69YN2 538 aaKnown RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 DLK2Q6UY11 383 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 FRMD5Q7Z6J6 570 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 CTU1Q7Z7A3 348 aaKnown RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 NPM2Q86SE8 214 aaKnown RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 USP48Q86UV5 1035 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 ZDHHC15Q96MV8 337 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 TEPSINQ96N21 525 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 TM9SF2Q99805 663 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 SLC52A2Q9HAB3 445 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 PDLIM7Q9NR12 457 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 SUSD2Q9UGT4 822 aa4.81□□□□□ -1.64
LRCH3-217ENST00000483442 ZNF214Q9UL59 606 aaPredicted RBP4.81□□□□□ -1.64
LRCH3-217ENST00000483442 TCERG1O14776 1098 aaKnown RBP4.8□□□□□ -1.64
LRCH3-217ENST00000483442 RNMTO43148 476 aaKnown RBP4.8□□□□□ -1.64
LRCH3-217ENST00000483442 VAMP4O75379 141 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 ASGR2P07307 311 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 GLI4P10075 376 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 ZNF16P17020 682 aaPredicted RBP4.8□□□□□ -1.64
LRCH3-217ENST00000483442 GUCY2CP25092 1073 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms