RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PSMC5P62195 406 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 EPHA7Q15375 998 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 NCAPH2Q6IBW4 605 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 LRRC8DQ7L1W4 858 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 TRMT1LQ7Z2T5 733 aaKnown RBP23.51■■□□□ 1.35
SEC13-217ENST00000482647 WNT8BQ93098 351 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 SCLYQ96I15 445 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 CEP131Q9UPN4 1083 aa23.51■■□□□ 1.35
SEC13-217ENST00000482647 DKC1O60832 514 aaKnown RBP eCLIP23.5■■□□□ 1.35
SEC13-217ENST00000482647 CAND2O75155 1236 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 PARNO95453 639 aaKnown RBP23.5■■□□□ 1.35
SEC13-217ENST00000482647 OATP04181 439 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 OR52Z1P0C646 297 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 QARSP47897 775 aaKnown RBP23.5■■□□□ 1.35
SEC13-217ENST00000482647 EPHB4P54760 987 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 SPIRE1Q08AE8 756 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 NBR1Q14596 966 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 UGCGQ16739 394 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 BRAPQ7Z569 592 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 TDHQ8IZJ6 230 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 IL23AQ9NPF7 189 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 PCDHB6Q9Y5E3 794 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 COL1A2P08123 1366 aa23.5■■□□□ 1.35
SEC13-217ENST00000482647 ZNF862O60290 1169 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 RPLP2P05387 115 aaKnown RBP23.49■■□□□ 1.35
SEC13-217ENST00000482647 P4HBP07237 508 aaKnown RBP23.49■■□□□ 1.35
SEC13-217ENST00000482647 PRKCEQ02156 737 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 MTHFD1LQ6UB35 978 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 RSPH3Q86UC2 560 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 BANK1Q8NDB2 785 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 TRAPPC12Q8WVT3 735 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 PCDHA2Q9Y5H9 948 aa23.49■■□□□ 1.35
SEC13-217ENST00000482647 PFKMP08237 780 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 KLRC1P26715 233 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 PTGDRQ13258 359 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 XKR3Q5GH77 459 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 ZNF618Q5T7W0 954 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 RUFY4Q6ZNE9 571 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 C16orf59Q7L2K0 433 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 RPAINQ86UA6 219 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 C4orf32Q8N8J7 132 aa23.48■■□□□ 1.35
SEC13-217ENST00000482647 RSPH10B2B2RC85 870 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 ZBTB42B2RXF5 422 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 LAD1O00515 517 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 RSPH10BP0C881 870 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 ACRP10323 421 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 TECP42680 631 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 SHHQ15465 462 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 PSRC1Q6PGN9 363 aaPredicted RBP23.47■■□□□ 1.35
SEC13-217ENST00000482647 FERMT3Q86UX7 667 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 NIFKQ9BYG3 293 aaKnown RBP23.47■■□□□ 1.35
SEC13-217ENST00000482647 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.47■■□□□ 1.35
SEC13-217ENST00000482647 LTBP2Q14767 1821 aa23.47■■□□□ 1.35
SEC13-217ENST00000482647 DDX11L8A8MPP1 907 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 STX6O43752 255 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 FGBP02675 491 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 PDIA4P13667 645 aaKnown RBP23.46■■□□□ 1.35
SEC13-217ENST00000482647 TMEM266Q2M3C6 531 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 HABP4Q5JVS0 413 aaKnown RBP23.46■■□□□ 1.35
SEC13-217ENST00000482647 C9orf50Q5SZB4 431 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 DEFB128Q7Z7B8 93 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 NEK9Q8TD19 979 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 DNAJB3Q8WWF6 145 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 ZBTB10Q96DT7 871 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 EIF2AK1Q9BQI3 630 aaKnown RBP23.46■■□□□ 1.35
SEC13-217ENST00000482647 ZSWIM4Q9H7M6 989 aa23.46■■□□□ 1.35
SEC13-217ENST00000482647 SMIM35A0A1B0GVV1 85 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 MAGEB2O15479 319 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 SLITRK3O94933 977 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 STBD1O95210 358 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 TMEM240Q5SV17 173 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 TRAF7Q6Q0C0 670 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 ZNF365Q70YC5 407 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 NME8Q8N427 588 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 DYDC2Q96IM9 177 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 HSD17B14Q9BPX1 270 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.45■■□□□ 1.348e-24■■■□□ 15.7
SEC13-217ENST00000482647 LXNQ9BS40 222 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 FTOQ9C0B1 505 aaKnown RBP eCLIP23.45■■□□□ 1.34
SEC13-217ENST00000482647 FAM49AQ9H0Q0 323 aaPredicted RBP23.45■■□□□ 1.34
SEC13-217ENST00000482647 RGL1Q9NZL6 768 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 SEPT9Q9UHD8 586 aaPredicted RBP23.45■■□□□ 1.34
SEC13-217ENST00000482647 MTMR6Q9Y217 621 aa23.45■■□□□ 1.34
SEC13-217ENST00000482647 C22orf31O95567 290 aa23.44■■□□□ 1.34
SEC13-217ENST00000482647 CTTNQ14247 550 aaKnown RBP23.44■■□□□ 1.34
SEC13-217ENST00000482647 FAM26DQ5JW98 314 aa23.44■■□□□ 1.34
SEC13-217ENST00000482647 IER5Q5VY09 327 aa23.44■■□□□ 1.34
SEC13-217ENST00000482647 TPH2Q8IWU9 490 aa23.44■■□□□ 1.34
SEC13-217ENST00000482647 C4orf19Q8IY42 314 aa23.44■■□□□ 1.34
SEC13-217ENST00000482647 ERMNQ8TAM6 284 aa23.44■■□□□ 1.34
SEC13-217ENST00000482647 POTEMA6NI47 508 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 NBNO60934 754 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 CTSHP09668 335 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 PRPHP41219 470 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 FXR2P51116 673 aaKnown RBP eCLIP23.43■■□□□ 1.34
SEC13-217ENST00000482647 CYP4A11Q02928 519 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 PDIA5Q14554 519 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 TARBP2Q15633 366 aaKnown RBP23.43■■□□□ 1.34
SEC13-217ENST00000482647 DTHD1Q6ZMT9 781 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 ANO5Q75V66 913 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms