RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, human

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM1A-204	ENST00000481879	IFRD2	Q12894	506 aa	Predicted RBP	4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	TBR1	Q16650	682 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	CXXC5	Q7LFL8	322 aa	Known RBP	4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	ZNF575	Q86XF7	245 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	CELF2-AS1	Q8N7Q2	184 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	CACTIN	Q8WUQ7	758 aa	Known RBP	4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	MSL2	Q9HCI7	577 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	ARHGEF4	Q9NR80	690 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	RIC8B	Q9NVN3	520 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	FBXO10	Q9UK96	956 aa		4.1	□□□□□ -1.75
KDM1A-204	ENST00000481879	TRAV20	A0A0B4J274	112 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	U2SURP	O15042	1029 aa	Known RBP	4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	ERCC5	P28715	1186 aa	Predicted RBP	4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	MSX2	P35548	267 aa	Predicted RBP	4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	KCNQ1	P51787	676 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	FOXL1	Q12952	345 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	TUBA3C	Q13748	450 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	GPR19	Q15760	415 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	DDR2	Q16832	855 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	TUBA3E	Q6PEY2	450 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	ARHGAP36	Q6ZRI8	547 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	USP30	Q70CQ3	517 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	ZNF428	Q96B54	188 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	GALNT8	Q9NY28	637 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	PLA2G3	Q9NZ20	509 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	TNFRSF18	Q9Y5U5	241 aa		4.09	□□□□□ -1.75
KDM1A-204	ENST00000481879	HMGCR	P04035	888 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	FGR	P09769	529 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	PTGS1	P23219	599 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	DNAJA1	P31689	397 aa	Known RBP	4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	ADCY8	P40145	1251 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	IL13RA1	P78552	427 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	HHEX	Q03014	270 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	ARID5A	Q03989	594 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	PAK1	Q13153	545 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	EIF4H	Q15056	248 aa	Known RBP	4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	FNDC7	Q5VTL7	733 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	EP400NL	Q6ZTU2	488 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	ASXL2	Q76L83	1435 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	SGMS1	Q86VZ5	419 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	CFHR4	Q92496	578 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	WNK4	Q96J92	1243 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	KIAA1683	Q9H0B3	1180 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	NELFA	Q9H3P2	528 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	MMRN2	Q9H8L6	949 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	INCENP	Q9NQS7	918 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	TLR9	Q9NR96	1032 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	SRPK3	Q9UPE1	567 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	ATP23	Q9Y6H3	246 aa		4.08	□□□□□ -1.76
KDM1A-204	ENST00000481879	ADH4	P08319	380 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	MAK	P20794	623 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	GJA4	P35212	333 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	NANOS3	P60323	173 aa	Known RBP	4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	GRM7	Q14831	915 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	STIL	Q15468	1287 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	TRIM68	Q6AZZ1	485 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	ANKS3	Q6ZW76	656 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	OSTM1	Q86WC4	334 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	MCF2L2	Q86YR7	1114 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	LRRC47	Q8N1G4	583 aa	Known RBP	4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	WDR48	Q8TAF3	677 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	ZNF483	Q8TF39	744 aa	Predicted RBP	4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	LARP4B	Q92615	738 aa	Known RBP	4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	FBXW5	Q969U6	566 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	CATSPERZ	Q9NTU4	200 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	CDC42EP3	Q9UKI2	254 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	TRAF6	Q9Y4K3	522 aa		4.07	□□□□□ -1.76
KDM1A-204	ENST00000481879	MAN2B1	O00754	1011 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	AQP7	O14520	342 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	WNT9A	O14904	365 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	AMY2A	P04746	511 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	PDE6A	P16499	860 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	AMY2B	P19961	511 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	MRE11	P49959	708 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	MEOX1	P50221	254 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	PCOLCE	Q15113	449 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	OTOP2	Q7RTS6	562 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	FILIP1	Q7Z7B0	1213 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	ADGRE4P	Q86SQ3	457 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	MTDH	Q86UE4	582 aa	Known RBP	4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	PTRH1	Q86Y79	214 aa	Known RBP	4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	LDLRAD3	Q86YD5	345 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	DNAJC10	Q8IXB1	793 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	GPR135	Q8IZ08	494 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	RTKN2	Q8IZC4	609 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	BTBD2	Q9BX70	525 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	OR10A2	Q9H208	303 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	GIT1	Q9Y2X7	761 aa		4.06	□□□□□ -1.76
KDM1A-204	ENST00000481879	PCSK5	Q92824	1860 aa		4.05	□□□□□ -1.76
KDM1A-204	ENST00000481879		A0A0G2JNJ9	132 aa		4.05	□□□□□ -1.76
KDM1A-204	ENST00000481879	PRAMEF25	A6NGN4	478 aa		4.05	□□□□□ -1.76
KDM1A-204	ENST00000481879	KLF4	O43474	513 aa		4.05	□□□□□ -1.76

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