RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 MROH7Q68CQ1 1323 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 EMSYQ7Z589 1322 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 IGKV6D-21A0A0A0MT36 114 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 DCDC2CA8MYV0 355 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 EML1O00423 815 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 CHMP2AO43633 222 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 GAS7O60861 476 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
SSBP1-210ENST00000481508 ATP4AP20648 1035 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 U2AF2P26368 475 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■■■■■ 34.9
SSBP1-210ENST00000481508 HOXC8P31273 242 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 SAFBQ15424 915 aaKnown RBP eCLIP11.96□□□□□ -0.49
SSBP1-210ENST00000481508 LRCH2Q5VUJ6 765 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 ZNF746Q6NUN9 644 aaPredicted RBP11.96□□□□□ -0.49
SSBP1-210ENST00000481508 NOSTRINQ8IVI9 506 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 KATNAL1Q9BW62 490 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 TEKT3Q9BXF9 490 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 PPP1R12CQ9BZL4 782 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.49
SSBP1-210ENST00000481508 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
SSBP1-210ENST00000481508 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
SSBP1-210ENST00000481508 CYP2C18P33260 490 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 MCM7P33993 719 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 EPHB4P54760 987 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 SPIRE1Q08AE8 756 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 PLCB4Q15147 1175 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 SHHQ15465 462 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 ZNF174Q15697 407 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 PTGISQ16647 500 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 HSCBQ8IWL3 235 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 C7orf31Q8N865 590 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 BADQ92934 168 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 RIT2Q99578 217 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 NOC4LQ9BVI4 516 aaKnown RBP11.95□□□□□ -0.5
SSBP1-210ENST00000481508 WNT8AQ9H1J5 351 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 TBC1D22BQ9NU19 505 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 SETD4Q9NVD3 440 aa11.95□□□□□ -0.5
SSBP1-210ENST00000481508 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
SSBP1-210ENST00000481508 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 IGSF9BQ9UPX0 1349 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 TREHO43280 583 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 ZNF862O60290 1169 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 STAT5BP51692 787 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 ADAM17P78536 824 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 KRT76Q01546 638 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 PTPN11Q06124 597 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-210ENST00000481508 TRIM71Q2Q1W2 868 aaKnown RBP11.94□□□□□ -0.5
SSBP1-210ENST00000481508 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 LARP1BQ659C4 914 aaKnown RBP11.94□□□□□ -0.5
SSBP1-210ENST00000481508 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 SWSAP1Q6NVH7 229 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 AFAP1L1Q8TED9 768 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 TRAPPC12Q8WVT3 735 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 GLG1Q92896 1179 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 VWCEQ96DN2 955 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
SSBP1-210ENST00000481508 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-210ENST00000481508 MTMR9Q96QG7 549 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 SMARCAD1Q9H4L7 1026 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 GABBR1Q9UBS5 961 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 ZNF215Q9UL58 517 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-210ENST00000481508 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
SSBP1-210ENST00000481508 C17orf102A2RUQ5 167 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 ZBTB42B2RXF5 422 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 BACH1O14867 736 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 NEMFO60524 1076 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 STBD1O95210 358 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 TIMP1P01033 207 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 CCL23P55773 120 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 PPP2R5CQ13362 524 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 GNL2Q13823 731 aaKnown RBP11.93□□□□□ -0.5
SSBP1-210ENST00000481508 CALCRLQ16602 461 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 MARCH8Q5T0T0 291 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 MIS18BP1Q6P0N0 1132 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 PLPPR4Q7Z2D5 763 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 MIER3Q7Z3K6 550 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 SMAP1Q8IYB5 467 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-210ENST00000481508 C4orf32Q8N8J7 132 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 PPM1EQ8WY54 764 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 SCLYQ96I15 445 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 FAM20AQ96MK3 541 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 OSBPL7Q9BZF2 842 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 ZNF302Q9NR11 478 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 DISC1Q9NRI5 854 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 ERAP1Q9NZ08 941 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 WRAP73Q9P2S5 460 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-210ENST00000481508 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 PCDHA10Q9Y5I2 948 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 WDFY4Q6ZS81 3184 aa11.93□□□□□ -0.5
SSBP1-210ENST00000481508 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-210ENST00000481508 WDR64B1ANS9 1081 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 H3BQV1 296 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms