RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 MAPK13O15264 365 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 ACSL3O95573 720 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 CHRNA3P32297 505 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.42
DDX39B-219ENST00000481456 LGSNQ5TDP6 509 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 CCDC110Q8TBZ0 833 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 HPS3Q969F9 1004 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 SGSM3Q96HU1 749 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 SCOCQ9UIL1 159 aa12.46□□□□□ -0.42
DDX39B-219ENST00000481456 GNPATO15228 680 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 FOSP01100 380 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TMOD1P28289 359 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 MFAP3P55082 362 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 SNX1Q13596 522 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 AGTP01019 485 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 CHN1P15882 459 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 ANXA13P27216 316 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 UBE2SQ16763 222 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 CFAP157Q5JU67 520 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 CCDC89Q8N998 374 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 PITPNM3Q9BZ71 974 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TBK1Q9UHD2 729 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 A0A0U1RQJ8 604 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 POC1B-GALNT4F8VUJ3 575 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 DCTN3O75935 186 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 PRPF6O94906 941 aaKnown RBP12.45□□□□□ -0.42
DDX39B-219ENST00000481456 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
DDX39B-219ENST00000481456 HSD17B3P37058 310 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 SPDL1Q96EA4 605 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 CFAP57Q96MR6 1250 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
DDX39B-219ENST00000481456 SKIP12755 728 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 SKOR1P84550 965 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 ODR4Q5SWX8 454 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 CAPRIN2Q6IMN6 1127 aaKnown RBP12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TTI2Q6NXR4 508 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 PALM2Q8IXS6 379 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 ARMC2Q8NEN0 867 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TSC22D3Q99576 134 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 TMBIM4Q9HC24 238 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 ANAPC4Q9UJX5 808 aa12.45□□□□□ -0.42
DDX39B-219ENST00000481456 PNMA6FA0A0J9YX94 578 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 TTLL1O95922 423 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 CASP7P55210 303 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 DCUN1D2Q6PH85 259 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 BACH1O14867 736 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 TTI1O43156 1089 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 DNAJC12Q9UKB3 198 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 LRRC10BA6NIK2 292 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
DDX39B-219ENST00000481456 MEIS1O00470 390 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 CFBP00751 764 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 RWDD2BP57060 319 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 CAPN12Q6ZSI9 719 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 CNPY4Q8N129 248 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-219ENST00000481456 PRMT1Q99873 361 aaKnown RBP12.44□□□□□ -0.42
DDX39B-219ENST00000481456 MAPK4P31152 587 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 IRX1P78414 480 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-219ENST00000481456 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 ARHGAP27Q6ZUM4 889 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 THOC1Q96FV9 657 aaKnown RBP12.44□□□□□ -0.42
DDX39B-219ENST00000481456 UBE2TQ9NPD8 197 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-219ENST00000481456 PXDNQ92626 1479 aa12.44□□□□□ -0.42
DDX39B-219ENST00000481456 ABCB11O95342 1321 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 NR3C1P04150 777 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 CDK8P49336 464 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 MAP7Q14244 749 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 IFNB1P01574 187 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
DDX39B-219ENST00000481456 RASIP1Q5U651 963 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 RNF207Q6ZRF8 634 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 FBXO11Q86XK2 927 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 TXNDC16Q9P2K2 825 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 NWD1Q149M9 1564 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 A0A087X0B3 334 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 E9PMD0 336 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 KLRC1P26715 233 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 HSPA9P38646 679 aaKnown RBP12.43□□□□□ -0.42
DDX39B-219ENST00000481456 PDIA5Q14554 519 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 KNOP1Q1ED39 458 aaKnown RBP12.43□□□□□ -0.42
DDX39B-219ENST00000481456 CYP4F22Q6NT55 531 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 FRMD5Q7Z6J6 570 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 FSBPO95073 299 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 IRX4P78413 519 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 PPP1R18Q6NYC8 613 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 ZNF449Q6P9G9 518 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 CFAP61Q8NHU2 1237 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms