RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CEP85Q6P2H3 762 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 LBX2Q6XYB7 198 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 CCAR1Q8IX12 1150 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 RPAP2Q8IXW5 612 aaPredicted RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 C12orf42Q96LP6 360 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 CCDC8Q9H0W5 538 aaPredicted RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 CHMP4BQ9H444 224 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 PIH1D3Q9NQM4 214 aaKnown RBP7.81□□□□□ -1.16
LRCH3-216ENST00000481048 RBPJLQ9UBG7 517 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 MYH7P12883 1935 aa7.81□□□□□ -1.16
LRCH3-216ENST00000481048 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 MYO9BQ13459 2157 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 TMPRSS2O15393 492 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 NDUFB5O43674 189 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 HMMRO75330 724 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 GH2P01242 217 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 FAM87AP0C7U9 286 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 RLBP1P12271 317 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 BMP8BP34820 402 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 ERVK-24P63145 666 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 DYNLL1P63167 89 aaKnown RBP7.8□□□□□ -1.16
LRCH3-216ENST00000481048 CDK5R2Q13319 367 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 ECM1Q16610 540 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 CERKLQ49MI3 558 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-216ENST00000481048 MAP3K21Q5TCX8 1036 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 CATSPERGQ6ZRH7 1159 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 WFDC3Q8IUB2 231 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 CLASRPQ8N2M8 674 aaKnown RBP7.8□□□□□ -1.16
LRCH3-216ENST00000481048 MAGEB6Q8N7X4 407 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 USP6NLQ92738 828 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 PAWRQ96IZ0 340 aaKnown RBP7.8□□□□□ -1.16
LRCH3-216ENST00000481048 KIAA1683Q9H0B3 1180 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 PIDD1Q9HB75 910 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 TXNRD2Q9NNW7 524 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 OGDHLQ9ULD0 1010 aa7.8□□□□□ -1.16
LRCH3-216ENST00000481048 BAZ2AQ9UIF9 1905 aaKnown RBP7.8□□□□□ -1.16
LRCH3-216ENST00000481048 BIN1O00499 593 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 RAB11FIP3O75154 756 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 SLFN14P0C7P3 912 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 CYP2B6P20813 491 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 RGS2P41220 211 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 SERPINB4P48594 390 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 ABCB5Q2M3G0 1257 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 GPR142Q7Z601 462 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 AACSQ86V21 672 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 PLD6Q8N2A8 252 aaKnown RBP7.79□□□□□ -1.16
LRCH3-216ENST00000481048 FAM181AQ8N9Y4 354 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 TRIB2Q92519 343 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 KIF1BPQ96EK5 621 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 MISP3Q96FF7 219 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 RIOK1Q9BRS2 568 aaKnown RBP7.79□□□□□ -1.16
LRCH3-216ENST00000481048 CRNKL1Q9BZJ0 848 aaKnown RBP7.79□□□□□ -1.16
LRCH3-216ENST00000481048 CCDC86Q9H6F5 360 aaKnown RBP7.79□□□□□ -1.16
LRCH3-216ENST00000481048 C1orf115Q9H7X2 142 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 ABCB6Q9NP58 842 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 HOXC10Q9NYD6 342 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 CRIM1Q9NZV1 1036 aa7.79□□□□□ -1.16
LRCH3-216ENST00000481048 SAP30BPQ9UHR5 308 aaKnown RBP7.79□□□□□ -1.16
LRCH3-216ENST00000481048 ZBED9Q6R2W3 1325 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 DDX60LQ5H9U9 1706 aaKnown RBP7.78□□□□□ -1.16
LRCH3-216ENST00000481048 RLFQ13129 1914 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 SLC15A5A6NIM6 579 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 STRNO43815 780 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 MSCO60682 206 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
LRCH3-216ENST00000481048 HOXC6P09630 235 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 ZKSCAN1P17029 563 aaPredicted RBP7.78□□□□□ -1.16
LRCH3-216ENST00000481048 ID3Q02535 119 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 GABPAQ06546 454 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 RAB3GAP1Q15042 981 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 RPS26P11Q5JNZ5 115 aaPredicted RBP7.78□□□□□ -1.16
LRCH3-216ENST00000481048 SLC9C2Q5TAH2 1124 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 MIGA1Q8NAN2 632 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 NETO1Q8TDF5 533 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 CCDC74AQ96AQ1 378 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 EDC3Q96F86 508 aaKnown RBP7.78□□□□□ -1.16
LRCH3-216ENST00000481048 FANCD2OSQ96PS1 177 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 FEZ1Q99689 392 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 APBA2Q99767 749 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 ATXN3LQ9H3M9 355 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 C11orf49Q9H6J7 331 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 ANTXR1Q9H6X2 564 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 SWAP70Q9UH65 585 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 DDX19BQ9UMR2 479 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 EXOC6BQ9Y2D4 811 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 NAV1Q8NEY1 1877 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 FRMPD3Q5JV73 1810 aa7.78□□□□□ -1.16
LRCH3-216ENST00000481048 LAMA3Q16787 3333 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 IFIT2P09913 472 aaKnown RBP7.77□□□□□ -1.17
LRCH3-216ENST00000481048 PDE6AP16499 860 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 VCAM1P19320 739 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 PLCD1P51178 756 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 ARHGAP4P98171 946 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms