RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 LINC01553A4QN01 128 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 MAGEB2O15479 319 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 IGBP1P78318 339 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
CCM2-213ENST00000480658 CDC42EP1Q00587 391 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 MGAT3Q09327 533 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 PRR16Q569H4 304 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 MARCH8Q5T0T0 291 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 CKAP2LQ8IYA6 745 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 DNAJB3Q8WWF6 145 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
CCM2-213ENST00000480658 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
CCM2-213ENST00000480658 UNC80Q8N2C7 3258 aa12.96□□□□□ -0.34
CCM2-213ENST00000480658 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 TRIP12Q14669 1992 aaPredicted RBP12.95□□□□□ -0.34
CCM2-213ENST00000480658 DKC1O60832 514 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCM2-213ENST00000480658 GAS7O60861 476 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 GHRP10912 638 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
CCM2-213ENST00000480658 PAK2Q13177 524 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 ADGRE1Q14246 886 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
CCM2-213ENST00000480658 Q4G0T1 1027 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 TIGD5Q53EQ6 642 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 MTHFD1LQ6UB35 978 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 EXOC8Q8IYI6 725 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 MAP7D2Q96T17 732 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
CCM2-213ENST00000480658 MAFBQ9Y5Q3 323 aaPredicted RBP12.95□□□□□ -0.34
CCM2-213ENST00000480658 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 CDY2AQ9Y6F7 541 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 MICAL3Q7RTP6 2002 aa12.95□□□□□ -0.34
CCM2-213ENST00000480658 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 GPR182O15218 404 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 DHX15O43143 795 aaKnown RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 CCNE2O96020 404 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 CHRNA1P02708 482 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 RB1P06400 928 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 LPIN1Q14693 890 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCM2-213ENST00000480658 LRCH2Q5VUJ6 765 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 RUFY4Q6ZNE9 571 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 ASB2Q96Q27 587 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 PCYT2Q99447 389 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 COL25A1Q9BXS0 654 aaPredicted RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 FAM49AQ9H0Q0 323 aaPredicted RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 NCOA5Q9HCD5 579 aaKnown RBP12.94□□□□□ -0.34
CCM2-213ENST00000480658 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 NRBP2Q9NSY0 501 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 CHD9Q3L8U1 2897 aa12.94□□□□□ -0.34
CCM2-213ENST00000480658 ADGRA3Q8IWK6 1321 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
CCM2-213ENST00000480658 SIP14410 1827 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 NCK2O43639 380 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 PFKFB2O60825 505 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 CYP3A7P24462 503 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 GRB10Q13322 594 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 SWSAP1Q6NVH7 229 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCM2-213ENST00000480658 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 MICALL1Q8N3F8 863 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 FIBCD1Q8N539 461 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 TBCKQ8TEA7 893 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 SLC5A5Q92911 643 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 HLA-CQ95604 372 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 JPH2Q9BR39 696 aaPredicted RBP12.93□□□□□ -0.34
CCM2-213ENST00000480658 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 LMAN2LQ9H0V9 348 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
CCM2-213ENST00000480658 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 CARNS1A5YM72 827 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 OATP04181 439 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 KLRC1P26715 233 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 CCDC85BQ15834 202 aaPredicted RBP12.92□□□□□ -0.34
CCM2-213ENST00000480658 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 NAALADL2Q58DX5 795 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 PPP4R3AQ6IN85 833 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 FAM117BQ6P1L5 589 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 LENG9Q96B70 501 aa12.92□□□□□ -0.34
CCM2-213ENST00000480658 MRPL38Q96DV4 380 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms