RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 C7orf25Q9BPX7 421 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 LRRC27Q9C0I9 530 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 ZNF302Q9NR11 478 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 TUBE1Q9UJT0 475 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 PTGS1P23219 599 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 AMPD3Q01432 767 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 SP4Q02446 784 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 DPYDQ12882 1025 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 MCM6Q14566 821 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 ZRSR1Q15695 479 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 XKR3Q5GH77 459 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 TLK2Q86UE8 772 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 SMARCAD1Q9H4L7 1026 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 KCND2Q9NZV8 630 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 KIAA1468Q9P260 1216 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 PPME1Q9Y570 386 aa18.8■□□□□ 0.6
SCAMP3-207ENST00000480219 SORBS3O60504 671 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 INHAP05111 366 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 CCND3P30281 292 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 YWHABP31946 246 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 CTCFP49711 727 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 RARRES1P49788 294 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 STAT5BP51692 787 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 PRKCEQ02156 737 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 ZSCAN23Q3MJ62 389 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 ANO5Q75V66 913 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 FAM167AQ96KS9 214 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 C16orf70Q9BSU1 422 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 NIFKQ9BYG3 293 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 TRIM9Q9C026 710 aa18.79■□□□□ 0.6
SCAMP3-207ENST00000480219 MYMKA6NI61 221 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 BACH1O14867 736 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 MSCO60682 206 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 OATP04181 439 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 LGALS2P05162 132 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 PRR29P0C7W0 189 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 HSPA1AP0DMV8 641 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 HSPA1BP0DMV9 641 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 CYP11B2P19099 503 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 CPT1AP50416 773 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 CAMK4Q16566 473 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 DGKDQ16760 1214 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 ARSHQ5FYA8 562 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 PIGOQ8TEQ8 1089 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 CEP89Q96ST8 783 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 AP5M1Q9H0R1 490 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 AZI2Q9H6S1 392 aa18.78■□□□□ 0.6
SCAMP3-207ENST00000480219 SYNRGQ9UMZ2 1314 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 ADAMTS4O75173 837 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 RARBP10826 455 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 ZNF445P59923 1031 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 PNOCQ13519 176 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 CUL4BQ13620 913 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 TARBP2Q15633 366 aaKnown RBP18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 C1orf186Q6ZWK4 172 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 OTUD6AQ7L8S5 288 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 GRAMD1CQ8IYS0 662 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 KLHDC9Q8NEP7 349 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 LENG1Q96BZ8 264 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 DNAJC19Q96DA6 116 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 FUCA2Q9BTY2 467 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 DDX20Q9UHI6 824 aaKnown RBP18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 PCDHA5Q9Y5H7 936 aa18.77■□□□□ 0.6
SCAMP3-207ENST00000480219 MYH9P35579 1960 aaKnown RBP18.77■□□□□ 0.59
SCAMP3-207ENST00000480219 ARID2Q68CP9 1835 aa18.77■□□□□ 0.59
SCAMP3-207ENST00000480219 FRMD3A2A2Y4 597 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 ZBTB39O15060 712 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 KLRC4O43908 158 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 KPNA6O60684 536 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 F2P00734 622 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 GUCY2CP25092 1073 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 AFMP43652 599 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 KCNB1Q14721 858 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 PKN2Q16513 984 aaKnown RBP18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 BRDTQ58F21 947 aaPredicted RBP18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 RINT1Q6NUQ1 792 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 BBXQ8WY36 941 aaPredicted RBP18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 GSDMAQ96QA5 445 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 TIPINQ9BVW5 301 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 HMX1Q9NP08 348 aaPredicted RBP18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 PDLIM7Q9NR12 457 aa18.76■□□□□ 0.59
SCAMP3-207ENST00000480219 PVALEFA0A1B0GWK0 134 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 HAS3O00219 553 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 SMC2O95347 1197 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 EHHADHQ08426 723 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 PLCB4Q15147 1175 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 LHX8Q68G74 356 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 CCSAPQ6IQ19 270 aaPredicted RBP18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 GPBP1Q86WP2 473 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 TRIM50Q86XT4 487 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms