RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MRPL42Q9Y6G3 142 aaKnown RBP8.1□□□□□ -1.11
COL17A1-205ENST00000480127 MBLAC1A4D2B0 266 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 SH2B2O14492 632 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 BACH1O14867 736 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 CDC45O75419 566 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 ADCY7P51828 1080 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 VCPP55072 806 aaKnown RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 PPFIA1Q13136 1202 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 RTN1Q16799 776 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 NAALADL2Q58DX5 795 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 FBXO47Q5MNV8 452 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 MARCH8Q5T0T0 291 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 TAF2Q6P1X5 1199 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 SUGP1Q8IWZ8 645 aaKnown RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 CMTR2Q8IYT2 770 aaKnown RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 FANCBQ8NB91 859 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 IGDCC4Q8TDY8 1250 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 DNAJB3Q8WWF6 145 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 ASIC4Q96FT7 647 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 NEK1Q96PY6 1258 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 MAP3K14Q99558 947 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 PRRX2Q99811 253 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 MTA3Q9BTC8 594 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 BARX2Q9UMQ3 279 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 USP15Q9Y4E8 981 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-205ENST00000480127 PCDHGC5Q9Y5F6 944 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 CDY2AQ9Y6F7 541 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 WDFY4Q6ZS81 3184 aa8.09□□□□□ -1.11
COL17A1-205ENST00000480127 KMT2EQ8IZD2 1858 aa8.09□□□□□ -1.12
COL17A1-205ENST00000480127 KLF18A0A0U1RQI7 1052 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 GFRA3O60609 400 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 ATP9AO75110 1047 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 HMGB1P09429 215 aaKnown RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 CD52P31358 61 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 LIFRP42702 1097 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 NRIP1P48552 1158 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 ANTXR2P58335 489 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 RBM10P98175 930 aaKnown RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 SIGLEC14Q08ET2 396 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 GRIK4Q16099 956 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 BMP2KLQ5H9B9 411 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 TSHZ1Q6ZSZ6 1077 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 CKAP2LQ8IYA6 745 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 SRBD1Q8N5C6 995 aaKnown RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 VN1R2Q8NFZ6 395 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 ATP8B4Q8TF62 1192 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 CCDC12Q8WUD4 166 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 POF1BQ8WVV4 589 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 PPP2R3CQ969Q6 453 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 ZBTB10Q96DT7 871 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 TCEANC2Q96MN5 208 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 PHF7Q9BWX1 381 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 LSG1Q9H089 658 aaKnown RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 GLT8D2Q9H1C3 349 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 SMARCAD1Q9H4L7 1026 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-205ENST00000480127 ERAP1Q9NZ08 941 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 TUBE1Q9UJT0 475 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 TTC3P53804 2025 aa8.08□□□□□ -1.12
COL17A1-205ENST00000480127 DOCK5Q9H7D0 1870 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 GSTTP1A0A1W2PQM5 241 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 DDX39AO00148 427 aaKnown RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 MEIS2O14770 477 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 KCNA2P16389 499 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 ATF7P17544 494 aaPredicted RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SMARCA1P28370 1054 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 AVPR2P30518 371 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 GATMP50440 423 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 METAP2P50579 478 aaKnown RBP eCLIP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 MRPS6P82932 125 aaKnown RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 PAN2Q504Q3 1202 aaKnown RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SPOUT1Q5T280 376 aaKnown RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 TMTC3Q6ZXV5 915 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 TRMT1LQ7Z2T5 733 aaKnown RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 NPAS4Q8IUM7 802 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SEPT1Q8WYJ6 367 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SUSD6Q92537 303 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 RPGRIP1Q96KN7 1286 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 JAKMIP1Q96N16 626 aaKnown RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SCLT1Q96NL6 688 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 FAM49AQ9H0Q0 323 aaPredicted RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SLC9A2Q9UBY0 812 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 LRFN2Q9ULH4 789 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 PCDHA6Q9UN73 950 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 GINS2Q9Y248 185 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SAMM50Q9Y512 469 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 PCDHA8Q9Y5H6 950 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 SQORQ9Y6N5 450 aa8.07□□□□□ -1.12
COL17A1-205ENST00000480127 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
COL17A1-205ENST00000480127 KIAA1671Q9BY89 1806 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 SMCO2A6NFE2 343 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms