RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	AKR1B1	P15121	316 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GUCY2C	P25092	1073 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MTIF2	P46199	727 aa	Known RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ORC2	Q13416	577 aa	Predicted RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SEPT2	Q15019	361 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CNNM4	Q6P4Q7	775 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TMEM179	Q6ZVK1	233 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CNOT6L	Q96LI5	555 aa	Known RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCDC17	Q96LX7	622 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	KIAA1683	Q9H0B3	1180 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EMILIN3	Q9NT22	766 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TCP11L1	Q9NUJ3	509 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AGPAT5	Q9NUQ2	364 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MAPK8IP1	Q9UQF2	711 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MGAM	O43451	1857 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PJA2	O43164	708 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PMS1	P54277	932 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	C2orf54	Q08AI8	447 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CCDC96	Q2M329	555 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	SWT1	Q5T5J6	900 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CCDC181	Q5TID7	509 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	FOXR2	Q6PJQ5	311 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	SIAH1	Q8IUQ4	282 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	RNF10	Q8N5U6	811 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	C1orf131	Q8NDD1	294 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	SPATA4	Q8NEY3	305 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CD99L2	Q8TCZ2	262 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	BCAS4	Q8TDM0	211 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	ACER1	Q8TDN7	264 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CEP89	Q96ST8	783 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	DUSP9	Q99956	384 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	C7orf25	Q9BPX7	421 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	IFIH1	Q9BYX4	1025 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	KAT14	Q9H8E8	782 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	STIM2	Q9P246	746 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739		A0A1W2PRG0	241 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739		M0R2N6	131 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PDE2A	O00408	941 aa	Predicted RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	RASA1	P20936	1047 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	LACTB	P83111	547 aa	Predicted RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PKN2	Q16513	984 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	USP17L2	Q6R6M4	530 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	OTOP1	Q7RTM1	612 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	DGKH	Q86XP1	1220 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	ABHD8	Q96I13	439 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	OSBPL9	Q96SU4	736 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	NUCKS1	Q9H1E3	243 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	LUC7L	Q9NQ29	371 aa	Known RBP	10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CPA4	Q9UI42	421 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PCDHA13	Q9Y5I0	950 aa		10.02	□□□□□ -0.81
SH3YL1-222	ENST00000479739	RLF	Q13129	1914 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MACROD2	A1Z1Q3	448 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	RCCD1	A6NED2	376 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	SRRM3	A6NNA2	597 aa	Predicted RBP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MPHOSPH10	O00566	681 aa	Known RBP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MYBL2	P10244	700 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CTGF	P29279	349 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PDE4D	Q08499	809 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	NBPF20	Q3BBV1	942 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MICALCL	Q6ZW33	695 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	IFT20	Q8IY31	132 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MICALL1	Q8N3F8	863 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	RIN2	Q8WYP3	895 aa	Predicted RBP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	ANKS1A	Q92625	1134 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	TMOD4	Q9NZQ9	345 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	LRWD1	Q9UFC0	647 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PNMA3	Q9UL41	463 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	FAM169A	Q9Y6X4	670 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MKI67	P46013	3256 aa	Known RBP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	SSU72P8	A0A1W2PR75	194 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	TSPY2	A6NKD2	308 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	ZNF185	O15231	689 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CCT5	P48643	541 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	KIF11	P52732	1056 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	GNGT1	P63211	74 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MIIP	Q5JXC2	388 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	EMC10	Q5UCC4	262 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CLEC10A	Q8IUN9	316 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	LZTS2	Q9BRK4	669 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PAGR1	Q9BTK6	254 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	LRRC1	Q9BTT6	524 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	TRIM9	Q9C026	710 aa		10.01	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PARP14	Q460N5	1801 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	GRIN2D	O15399	1336 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	PLIN4	Q96Q06	1357 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MAN2A1	Q16706	1144 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CFAP221	Q4G0U5	840 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	VWA3B	Q502W6	1294 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	ANKRD40	Q6AI12	368 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	MCTP2	Q6DN12	878 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CENPP	Q6IPU0	288 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	C8orf74	Q6P047	294 aa		10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	FBXO46	Q6PJ61	603 aa	Predicted RBP	10	□□□□□ -0.81
SH3YL1-222	ENST00000479739	CABP7	Q86V35	215 aa		10	□□□□□ -0.81

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