RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SPZ1Q9BXG8 430 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 NOD2Q9HC29 1040 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 USP17L5A8MUK1 530 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 SKAP2O75563 359 aaPredicted RBP22.58■■□□□ 1.2
COL13A1-208ENST00000479733 UCHL3P15374 230 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 IFNAR2P48551 515 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 GJB7Q6PEY0 223 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 FMO2Q99518 471 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 MTFR1LQ9H019 292 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 KIAA1024Q9UPX6 916 aa22.58■■□□□ 1.2
COL13A1-208ENST00000479733 CCT8L1PA6NM43 557 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 ATP6V1G2O95670 118 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 LACTB2Q53H82 288 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 RBM46Q8TBY0 533 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 SCFD1Q8WVM8 642 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 THOC1Q96FV9 657 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 ELAC2Q9BQ52 826 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 SLC24A3Q9HC58 644 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 EMILIN3Q9NT22 766 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 HDAC9Q9UKV0 1011 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 KRT18P05783 430 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 NR2F2P24468 414 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 IFI16Q16666 785 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 ERMARDQ5T6L9 678 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 EIF1ADQ8N9N8 165 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 U2AF1L4Q8WU68 220 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 GLG1Q92896 1179 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 CALR3Q96L12 384 aaKnown RBP22.57■■□□□ 1.2
COL13A1-208ENST00000479733 EYA3Q99504 573 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 LZTS2Q9BRK4 669 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 CCDC113Q9H0I3 377 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 SWAP70Q9UH65 585 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 L3MBTL1Q9Y468 752 aa22.57■■□□□ 1.2
COL13A1-208ENST00000479733 NHSL1Q5SYE7 1610 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 SPDYE3A6NKU9 549 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 MGRN1O60291 552 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 PAEPP09466 180 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 GRIK5Q16478 980 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 SLC51AQ86UW1 340 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 STAMBPL1Q96FJ0 436 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 CEP63Q96MT8 703 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 KDM4CQ9H3R0 1056 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 OSGEPQ9NPF4 335 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 MYH7BA7E2Y1 1941 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 MYH4Q9Y623 1939 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 PPIP5K2O43314 1243 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 BUB1BO60566 1050 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-208ENST00000479733 VIMP08670 466 aaKnown RBP22.56■■□□□ 1.2
COL13A1-208ENST00000479733 SLC8A1P32418 973 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 ARHGAP27Q6ZUM4 889 aa22.56■■□□□ 1.2
COL13A1-208ENST00000479733 CCDC188H7C350 402 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 CES2O00748 559 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 SLCO1A2P46721 670 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 PLTPP55058 493 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 MYO1EQ12965 1108 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 LRRC27Q9C0I9 530 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 CETN3O15182 167 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 EIF6P56537 245 aaKnown RBP22.55■■□□□ 1.2
COL13A1-208ENST00000479733 IFI35P80217 286 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-208ENST00000479733 ZNF211Q13398 564 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-208ENST00000479733 PPP2R5AQ15172 486 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 TMEM119Q4V9L6 283 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 ARMC9Q7Z3E5 817 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 GPBP1Q86WP2 473 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 LRRC34Q8IZ02 419 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 ANKS4BQ8N8V4 417 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 CCDC63Q8NA47 563 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 FAM129AQ9BZQ8 928 aa22.55■■□□□ 1.2
COL13A1-208ENST00000479733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.55■■□□□ 1.2
COL13A1-208ENST00000479733 AJAP1Q9UKB5 411 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-208ENST00000479733 H2AFZP0C0S5 128 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 ABCB4P21439 1286 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 UBAP2Q5T6F2 1119 aaKnown RBP22.54■■□□□ 1.2
COL13A1-208ENST00000479733 H2AFVQ71UI9 128 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 GNA14O95837 355 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 ADCY7P51828 1080 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 CASP5P51878 434 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 PDIA5Q14554 519 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 EXOC3L4Q17RC7 722 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 CCDC65Q8IXS2 484 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 CEP95Q96GE4 821 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 PRMT1Q99873 361 aaKnown RBP22.54■■□□□ 1.2
COL13A1-208ENST00000479733 SNX24Q9Y343 169 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 DNAJC8O75937 253 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-208ENST00000479733 FLOT1O75955 427 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 MRPL12P52815 198 aaKnown RBP22.54■■□□□ 1.2
COL13A1-208ENST00000479733 ITPK1Q13572 414 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 SLITRK6Q9H5Y7 841 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 AZI2Q9H6S1 392 aa22.54■■□□□ 1.2
COL13A1-208ENST00000479733 POTEB3A0JP26 581 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 POTECB2RU33 542 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 ZBTB48P10074 688 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-208ENST00000479733 POTEBQ6S5H4 581 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 NT5DC3Q86UY8 548 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 CUL5Q93034 780 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 KCTD10Q9H3F6 313 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 FAM114A2Q9NRY5 505 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 DDX25Q9UHL0 483 aaKnown RBP22.53■■□□□ 1.2
COL13A1-208ENST00000479733 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms