RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 TBC1D8O95759 1140 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 SCGB1D2O95969 90 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 ATP2A2P16615 1042 aaKnown RBP4.82□□□□□ -1.64
NF1-209ENST00000479536 LSSP48449 732 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 ST5P78524 1137 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 PRR5P85299 388 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 ATP13A4Q4VNC1 1196 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 BICRALQ6AI39 1079 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 IQSEC1Q6DN90 963 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 OVCH1Q7RTY7 1134 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 SPRED1Q7Z699 444 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 CPNE8Q86YQ8 564 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 NAT16Q8N8M0 369 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 CHTF18Q8WVB6 975 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 POLR3GLQ9BT43 218 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 RNF38Q9H0F5 515 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 SLITRK6Q9H5Y7 841 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 ZIM2Q9NZV7 527 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 PPARGC1AQ9UBK2 798 aaKnown RBP4.82□□□□□ -1.64
NF1-209ENST00000479536 DBR1Q9UK59 544 aaKnown RBP4.82□□□□□ -1.64
NF1-209ENST00000479536 PTPDC1A2A3K4 754 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 F8W031 263 aaPredicted RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 SRGAP3O43295 1099 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 PRKD3O94806 890 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 NCAM1P13591 858 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 GRK2P25098 689 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 GRK3P35626 688 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 SARSP49591 514 aaKnown RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 KPNA1P52294 538 aaPredicted RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 OCRLQ01968 901 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 LSAMPQ13449 338 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 PIN1Q13526 163 aaPredicted RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 ARHGAP44Q17R89 818 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CRB2Q5IJ48 1285 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 C16orf59Q7L2K0 433 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 ZBTB46Q86UZ6 589 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 C11orf74Q86VG3 221 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 PASD1Q8IV76 773 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CCDC146Q8IYE0 955 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CHPFQ8IZ52 775 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 Q8N1X5 172 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CISD2Q8N5K1 135 aaKnown RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 SH3RF3Q8TEJ3 882 aaPredicted RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 HOOK2Q96ED9 719 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CHAMP1Q96JM3 812 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 EMC7Q9NPA0 242 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 AASDHPPTQ9NRN7 309 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CATSPERZQ9NTU4 200 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 SPTLC3Q9NUV7 552 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 FBXL7Q9UJT9 491 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 CBLCQ9ULV8 474 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 SPEF1Q9Y4P9 236 aa4.81□□□□□ -1.64
NF1-209ENST00000479536 TIMM13Q9Y5L4 95 aaPredicted RBP4.81□□□□□ -1.64
NF1-209ENST00000479536 TNKSO95271 1327 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 E2F8A0AVK6 867 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 C7orf72A4D263 438 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 CYR61O00622 381 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 KIF3BO15066 747 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 ULK1O75385 1050 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 FBXO21O94952 628 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 PLATP00750 562 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 ASGR2P07307 311 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 BCL6P41182 706 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 GTF2A2P52657 109 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 RPL11P62913 178 aaKnown RBP4.8□□□□□ -1.64
NF1-209ENST00000479536 CRY1Q16526 586 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 TBC1D10BQ4KMP7 808 aaPredicted RBP4.8□□□□□ -1.64
NF1-209ENST00000479536 HLA-DQA1Q5Y7H0 255 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 CYP2R1Q6VVX0 501 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 B3GNT8Q7Z7M8 397 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 ZNF761Q86XN6 746 aaPredicted RBP4.8□□□□□ -1.64
NF1-209ENST00000479536 C2orf69Q8N8R5 385 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 ALG3Q92685 438 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 DVL3Q92997 716 aaPredicted RBP4.8□□□□□ -1.64
NF1-209ENST00000479536 KCNJ15Q99712 375 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 CDH19Q9H159 772 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 NTMQ9P121 344 aa4.8□□□□□ -1.64
NF1-209ENST00000479536 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 K7ESF4 209 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 NPHS1O60500 1241 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 TACR1P25103 407 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 ACVRL1P37023 503 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 FAPQ12884 760 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 CREB3L3Q68CJ9 461 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 OTOP1Q7RTM1 612 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 CCAR1Q8IX12 1150 aaKnown RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 MYO1HQ8N1T3 1032 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 CBARPQ8N350 705 aaPredicted RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 DPF3Q92784 378 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 RTFDC1Q9BY42 306 aaPredicted RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 VTA1Q9NP79 307 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 PDLIM7Q9NR12 457 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 OXSMQ9NWU1 459 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 CLDND1Q9NY35 253 aa4.79□□□□□ -1.64
NF1-209ENST00000479536 H2AFY2Q9P0M6 372 aaPredicted RBP4.79□□□□□ -1.64
NF1-209ENST00000479536 ST6GALNAC2Q9UJ37 374 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms