RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 AZI2Q9H6S1 392 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 TRPC6Q9Y210 931 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 PCDHGC5Q9Y5F6 944 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 KAT6AQ92794 2004 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 MEIS2O14770 477 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 ATP9AO75110 1047 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 RTN4RL1Q86UN2 441 aaPredicted RBP18.47■□□□□ 0.55
DDX56-210ENST00000479440 PLEKHM2Q8IWE5 1019 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 SPZ1Q9BXG8 430 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 PLXNA4Q9HCM2 1894 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 KDM3AQ9Y4C1 1321 aa18.47■□□□□ 0.55
DDX56-210ENST00000479440 PER2O15055 1255 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 INSRRP14616 1297 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 IBSPP21815 317 aaPredicted RBP18.46■□□□□ 0.55
DDX56-210ENST00000479440 GATMP50440 423 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 TMEM62Q0P6H9 643 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 THNSL1Q8IYQ7 743 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
DDX56-210ENST00000479440 CELF4Q9BZC1 486 aaKnown RBP18.46■□□□□ 0.55
DDX56-210ENST00000479440 JPH1Q9HDC5 661 aaPredicted RBP18.46■□□□□ 0.55
DDX56-210ENST00000479440 C1orf112Q9NSG2 853 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 PKD2L1Q9P0L9 805 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 PCDHB7Q9Y5E2 793 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 PCDHA2Q9Y5H9 948 aa18.46■□□□□ 0.55
DDX56-210ENST00000479440 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
DDX56-210ENST00000479440 USP34Q70CQ2 3546 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 FGF18O76093 207 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 ITGB5P18084 799 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 KIF5BP33176 963 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 ODR4Q5SWX8 454 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 B4GALNT3Q6L9W6 998 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 NME8Q8N427 588 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 VN1R2Q8NFZ6 395 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 ZBTB10Q96DT7 871 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 NR2E1Q9Y466 385 aa18.45■□□□□ 0.54
DDX56-210ENST00000479440 SMIM35A0A1B0GVV1 85 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 DENND3A2RUS2 1198 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 TBKBP1A7MCY6 615 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 PROB1E7EW31 1015 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 H0Y858 1186 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 MAFGO15525 162 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 GALR2O43603 387 aaPredicted RBP18.44■□□□□ 0.54
DDX56-210ENST00000479440 LAG3P18627 525 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 TECP42680 631 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 KRT76Q01546 638 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 MTMR3Q13615 1198 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 SMC5Q8IY18 1101 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 COLGALT1Q8NBJ5 622 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 NCOA7Q8NI08 942 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 RIPOR3Q96MK2 946 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 MAP3K14Q99558 947 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 TMEM260Q9NX78 707 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 LZTS1Q9Y250 596 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 UBIAD1Q9Y5Z9 338 aa18.44■□□□□ 0.54
DDX56-210ENST00000479440 SPDYE3A6NKU9 549 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 FSCN2O14926 492 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 RBM10P98175 930 aaKnown RBP18.43■□□□□ 0.54
DDX56-210ENST00000479440 NFX1Q12986 1120 aaKnown RBP18.43■□□□□ 0.54
DDX56-210ENST00000479440 PLPP4Q5VZY2 271 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 ANKRD54Q6NXT1 300 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 TMEM184AQ6ZMB5 413 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 RASGRP4Q8TDF6 673 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 SENP2Q9HC62 589 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 JADE2Q9NQC1 790 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 SLC9A2Q9UBY0 812 aa18.43■□□□□ 0.54
DDX56-210ENST00000479440 DDAH1O94760 285 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 CYP21A2P08686 494 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 HOXB8P17481 243 aaPredicted RBP18.42■□□□□ 0.54
DDX56-210ENST00000479440 SMARCA1P28370 1054 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 PLCB4Q15147 1175 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 TMEM266Q2M3C6 531 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 PLPPR4Q7Z2D5 763 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 UBALD2Q8IYN6 164 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 PCYT2Q99447 389 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 SDF4Q9BRK5 362 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 S1PR5Q9H228 398 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
DDX56-210ENST00000479440 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 ERVK-5Q9HDB9 667 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 ENTPD7Q9NQZ7 604 aa18.42■□□□□ 0.54
DDX56-210ENST00000479440 PUF60Q9UHX1 559 aaKnown RBP18.42■□□□□ 0.54
DDX56-210ENST00000479440 TRIOO75962 3097 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 RPS6KA5O75582 802 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 SP100P23497 879 aaPredicted RBP18.41■□□□□ 0.54
DDX56-210ENST00000479440 GNAQP50148 359 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 SLC26A2P50443 739 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 ERVFC1P60507 584 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 AAMPQ13685 434 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 KCNC3Q14003 757 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 MTHFD1LQ6UB35 978 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 SLC24A5Q71RS6 500 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 KREMEN2Q8NCW0 462 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 TRAPPC12Q8WVT3 735 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 MRPS27Q92552 414 aaKnown RBP18.41■□□□□ 0.54
DDX56-210ENST00000479440 TCF25Q9BQ70 676 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 IL25Q9H293 177 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms