RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PCDHA2Q9Y5H9 948 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 EVPLQ92817 2033 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 SCN5AQ14524 2016 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 MARK3P27448 753 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 EPHB4P54760 987 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 EPHA7Q15375 998 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 CALCRLQ16602 461 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 LARP1BQ659C4 914 aaKnown RBP17.42■□□□□ 0.38
C9orf3-217ENST00000479161 TRAF7Q6Q0C0 670 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 RSPH3Q86UC2 560 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 NME8Q8N427 588 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 PPP1R13LQ8WUF5 828 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 VWCEQ96DN2 955 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 GABBR1Q9UBS5 961 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 PPME1Q9Y570 386 aa17.42■□□□□ 0.38
C9orf3-217ENST00000479161 SMIM35A0A1B0GVV1 85 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 H3BQV1 296 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 LAD1O00515 517 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 MAGEB2O15479 319 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 MARCH6O60337 910 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 P4HBP07237 508 aaKnown RBP17.41■□□□□ 0.38
C9orf3-217ENST00000479161 FXR1P51114 621 aaKnown RBP eCLIP17.41■□□□□ 0.38
C9orf3-217ENST00000479161 FOSBP53539 338 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 CCL23P55773 120 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 PSMC5P62195 406 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 SHHQ15465 462 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■■■□□ 15.2
C9orf3-217ENST00000479161 NIFKQ9BYG3 293 aaKnown RBP17.41■□□□□ 0.38
C9orf3-217ENST00000479161 MTIF3Q9H2K0 278 aaKnown RBP17.41■□□□□ 0.38
C9orf3-217ENST00000479161 SQORQ9Y6N5 450 aa17.41■□□□□ 0.38
C9orf3-217ENST00000479161 LAMA2P24043 3122 aaKnown RBP17.41■□□□□ 0.38
C9orf3-217ENST00000479161 ZBTB42B2RXF5 422 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 ZNF862O60290 1169 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 FGBP02675 491 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 QARSP47897 775 aaKnown RBP17.4■□□□□ 0.38
C9orf3-217ENST00000479161 GPNMBQ14956 572 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 ZNF618Q5T7W0 954 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 WNT8BQ93098 351 aa17.4■□□□□ 0.38
C9orf3-217ENST00000479161 TTC12Q9H892 705 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-217ENST00000479161 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 WNT7AO00755 349 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 EFCAB14O75071 495 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 BAIAP3O94812 1187 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 OATP04181 439 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 ACTN1P12814 892 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 THPOP40225 353 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-217ENST00000479161 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
C9orf3-217ENST00000479161 C9orf50Q5SZB4 431 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 MTHFD1LQ6UB35 978 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 ZNF365Q70YC5 407 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 BRAPQ7Z569 592 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 C4orf19Q8IY42 314 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 GJA10Q969M2 543 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 SCLYQ96I15 445 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 UIMC1Q96RL1 719 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 KDM3AQ9Y4C1 1321 aa17.39■□□□□ 0.37
C9orf3-217ENST00000479161 EML1O00423 815 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 CHMP2AO43633 222 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 STBD1O95210 358 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 LYPLA2O95372 231 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 KLRC1P26715 233 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 MCM7P33993 719 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 PRPHP41219 470 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 SMAD3P84022 425 aaKnown RBP17.38■□□□□ 0.37
C9orf3-217ENST00000479161 PRKCEQ02156 737 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 PDIA5Q14554 519 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 IER5Q5VY09 327 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 EXOC8Q8IYI6 725 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 C4orf32Q8N8J7 132 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 STK24Q9Y6E0 443 aa17.38■□□□□ 0.37
C9orf3-217ENST00000479161 OR52Z1P0C646 297 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 XRCC6P12956 609 aaKnown RBP eCLIP17.37■□□□□ 0.37
C9orf3-217ENST00000479161 MUTP22033 750 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 MBTPS1Q14703 1052 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 UGCGQ16739 394 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 CNKSR3Q6P9H4 555 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 RNPC3Q96LT9 517 aaKnown RBP17.37■□□□□ 0.37
C9orf3-217ENST00000479161 TMEM60Q9H2L4 133 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 ZSWIM4Q9H7M6 989 aa17.37■□□□□ 0.37
C9orf3-217ENST00000479161 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
C9orf3-217ENST00000479161 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-217ENST00000479161 ABHD14A-ACY1A0A1B0GW23 586 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-217ENST00000479161 NBNO60934 754 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 C22orf31O95567 290 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 TXKP42681 527 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms