RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 NOX5Q96PH1 765 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 ALS2CR12Q96Q35 445 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 RRP15Q9Y3B9 282 aaKnown RBP11.88□□□□□ -0.51
VPS52-217ENST00000478934 HYOU1Q9Y4L1 999 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 TARSL2A2RTX5 802 aaKnown RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 SREBF1P36956 1147 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 KNOP1Q1ED39 458 aaKnown RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 MAP9Q49MG5 647 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 ACBD3Q9H3P7 528 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 MED4Q9NPJ6 270 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 COL11A2P13942 1736 aaPredicted RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 ASTN1O14525 1302 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 SSU72P8A0A1W2PR75 194 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 GOLGA6BA6NDN3 693 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 GLI1P08151 1106 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 PON1P27169 355 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 Q4G0T1 1027 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 RBM26Q5T8P6 1007 aaKnown RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 MIGA2Q7L4E1 593 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 TRMT1LQ7Z2T5 733 aaKnown RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 IRF2BP2Q7Z5L9 587 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 MMGT1Q8N4V1 131 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 GOLGA6L1Q8N7Z2 621 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 IFT81Q8WYA0 676 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 DYDC2Q96IM9 177 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 GLIS2Q9BZE0 524 aaPredicted RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
VPS52-217ENST00000478934 ARMCX3Q9UH62 379 aaPredicted RBP11.87□□□□□ -0.51
VPS52-217ENST00000478934 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
VPS52-217ENST00000478934 AP3B2Q13367 1082 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 PLS1Q14651 629 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 NAB2Q15742 525 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 ASIC2Q16515 512 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 SLC18A3Q16572 532 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 KCTD16Q68DU8 428 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
VPS52-217ENST00000478934 SRLQ86TD4 932 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
VPS52-217ENST00000478934 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
VPS52-217ENST00000478934 IGLV3-22A0A075B6J6 115 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 RAD17O75943 681 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 NR3C1P04150 777 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 FAM153BP0C7A2 387 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 UCHL3P15374 230 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS52-217ENST00000478934 MARSP56192 900 aaKnown RBP11.86□□□□□ -0.51
VPS52-217ENST00000478934 FAM153CQ494X1 144 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 IQCDQ96DY2 449 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 GMCL1Q96IK5 515 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS52-217ENST00000478934 FAM153AQ9UHL3 310 aa11.86□□□□□ -0.51
VPS52-217ENST00000478934 QSER1Q2KHR3 1735 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 H0YIN7 160 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
VPS52-217ENST00000478934 TGFB1I1O43294 461 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 SLITRK3O94933 977 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 CARSP49589 748 aaKnown RBP11.85□□□□□ -0.51
VPS52-217ENST00000478934 GUCY2FP51841 1108 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 ZC3H3Q8IXZ2 948 aaKnown RBP11.85□□□□□ -0.51
VPS52-217ENST00000478934 SH2D3CQ8N5H7 860 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 GMCL1P1Q8NEA9 526 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 CWC15Q9P013 229 aaKnown RBP11.85□□□□□ -0.51
VPS52-217ENST00000478934 FAM184BQ9ULE4 1060 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 RABGAP1Q9Y3P9 1069 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 GOLGA6CA6NDK9 693 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 C21orf2O43822 256 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 GNA14O95837 355 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 KRT14P02533 472 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 AFPP02771 609 aaKnown RBP11.85□□□□□ -0.51
VPS52-217ENST00000478934 TUBBP07437 444 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 GOLGA6DP0CG33 693 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 ARP10275 920 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 TCP1P17987 556 aaKnown RBP11.85□□□□□ -0.51
VPS52-217ENST00000478934 DGKZQ13574 1117 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 EXOC3L4Q17RC7 722 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 C8orf74Q6P047 294 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 MYCT1Q8N699 235 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 ERMNQ8TAM6 284 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 EDEM3Q9BZQ6 932 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 VIPAS39Q9H9C1 493 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 GOLGA6AQ9NYA3 693 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 SERPINA10Q9UK55 444 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 NFU1Q9UMS0 254 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 TRAF3IP3Q9Y228 551 aa11.85□□□□□ -0.51
VPS52-217ENST00000478934 PITPNM2Q9BZ72 1349 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms