RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 DNAJB3Q8WWF6 145 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 DCTPP1Q9H773 170 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 CYP26B1Q9NR63 512 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 PUF60Q9UHX1 559 aaKnown RBP11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 SPEGQ15772 3267 aa11.27□□□□□ -0.61
SMARCB1-206ENST00000477836 KAT6AQ92794 2004 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 TBKBP1A7MCY6 615 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 ACAP1Q15027 740 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 PGM5Q15124 567 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 RARS2Q5T160 578 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 CYFIP1Q7L576 1253 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 C12orf76Q8N812 135 aaPredicted RBP11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 MRPS27Q92552 414 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 GPR20Q99678 358 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 NGRNQ9NPE2 291 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 TYW1Q9NV66 732 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 NCDNQ9UBB6 729 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 DUSP12Q9UNI6 340 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 USTQ9Y2C2 406 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 PCDHB7Q9Y5E2 793 aa11.26□□□□□ -0.61
SMARCB1-206ENST00000477836 ORC4O43929 436 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 SMARCA5O60264 1052 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 EOMESO95936 686 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 NUCB1Q02818 461 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 PAK2Q13177 524 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 ATAT1Q5SQI0 421 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 CHD1LQ86WJ1 897 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 COL26A1Q96A83 441 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 TUBE1Q9UJT0 475 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 PADI3Q9ULW8 664 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 LZTS1Q9Y250 596 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 FNDC1Q4ZHG4 1894 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 PKD1L2Q7Z442 2459 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 ZZEF1O43149 2961 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 FANCMQ8IYD8 2048 aa11.25□□□□□ -0.61
SMARCB1-206ENST00000477836 DOCK5Q9H7D0 1870 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 PRR5-ARHGAP8B1AHC4 643 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 NARSO43776 548 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 DHX16O60231 1041 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 CFHP08603 1231 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 CCND2P30279 289 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 CA8P35219 290 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 SARSP49591 514 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 HSD17B4P51659 736 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 ARHGAP8P85298 464 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 SP4Q02446 784 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 PPFIA1Q13136 1202 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 COL9A3Q14050 684 aaPredicted RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 VARS2Q5ST30 1063 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 FAM102BQ5T8I3 360 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 TSHZ3Q63HK5 1081 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 C1orf210Q8IVY1 113 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 RTKNQ9BST9 563 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 ANAPC4Q9UJX5 808 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 TELO2Q9Y4R8 837 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 MYH6P13533 1939 aa11.24□□□□□ -0.61
SMARCB1-206ENST00000477836 KRBA1A5PL33 1030 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 OPLAHO14841 1288 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 FOXP2O15409 715 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 LAG3P18627 525 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 HOXA13P31271 388 aaPredicted RBP11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 TMEM62Q0P6H9 643 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 NEDD9Q14511 834 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 GRIK4Q16099 956 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 IER5Q5VY09 327 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 XRRA1Q6P2D8 792 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 SKAP1Q86WV1 359 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 ZBTB10Q96DT7 871 aa11.23□□□□□ -0.61
SMARCB1-206ENST00000477836 TTC14Q96N46 770 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms