RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ZBED2Q9BTP6 218 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 TSPYL2Q9H2G4 693 aaPredicted RBP16■□□□□ 0.15
PDE6D-204ENST00000477748 TNFRSF10AO00220 468 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 MSH4O15457 936 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 GJB5O95377 273 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 TDP2O95551 362 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 FOSBP53539 338 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 IGBP1P78318 339 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 ADAM17P78536 824 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 DEFB103AP81534 67 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 KRT76Q01546 638 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 TAP1Q03518 808 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 RABEP1Q15276 862 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 GRIK4Q16099 956 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 ZNF746Q6NUN9 644 aaPredicted RBP15.99■□□□□ 0.15
PDE6D-204ENST00000477748 ABHD15Q6UXT9 468 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 OXER1Q8TDS5 423 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 BRMS1Q9HCU9 246 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 TRPC6Q9Y210 931 aa15.99■□□□□ 0.15
PDE6D-204ENST00000477748 PRRC2BQ5JSZ5 2229 aaKnown RBP15.99■□□□□ 0.15
PDE6D-204ENST00000477748 WDR81Q562E7 1941 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 CYP3A7-CYP3A51PA0A087WV96 503 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 IGKV6D-21A0A0A0MT36 114 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 RRN3P2A6NIE6 340 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 INSRRP14616 1297 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 CYP3A7P24462 503 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 KRT2P35908 639 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 SLC26A2P50443 739 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 TRIM29Q14134 588 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 Q4G0T1 1027 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 SWSAP1Q6NVH7 229 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 MOXD1Q6UVY6 613 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 PIK3AP1Q6ZUJ8 805 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 SMAP1Q8IYB5 467 aaPredicted RBP15.98■□□□□ 0.15
PDE6D-204ENST00000477748 ARNTL2Q8WYA1 636 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 RAD9AQ99638 391 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 ZNF302Q9NR11 478 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 SH2B1Q9NRF2 756 aaPredicted RBP15.98■□□□□ 0.15
PDE6D-204ENST00000477748 TUBE1Q9UJT0 475 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 SAMM50Q9Y512 469 aa15.98■□□□□ 0.15
PDE6D-204ENST00000477748 POTEB3A0JP26 581 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 GAS7O60861 476 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 AMHP03971 560 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 PSAPP07602 524 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 CTSHP09668 335 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 CCDC85BQ15834 202 aaPredicted RBP15.97■□□□□ 0.15
PDE6D-204ENST00000477748 TCTN1Q2MV58 587 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 LETM2Q2VYF4 491 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 PLEKHG4Q58EX7 1191 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 TAF2Q6P1X5 1199 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 PDXDC2PQ6P474 469 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 POTEBQ6S5H4 581 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 NEK8Q86SG6 692 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 CCDC60Q8IWA6 550 aaPredicted RBP15.97■□□□□ 0.15
PDE6D-204ENST00000477748 SEPT8Q92599 483 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 RIT2Q99578 217 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
PDE6D-204ENST00000477748 TEKT3Q9BXF9 490 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 PCDHA10Q9Y5I2 948 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 BDP1A6H8Y1 2624 aa15.97■□□□□ 0.15
PDE6D-204ENST00000477748 MBLAC1A4D2B0 266 aaPredicted RBP15.96■□□□□ 0.15
PDE6D-204ENST00000477748 ST18O60284 1047 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 ARHGEF15O94989 841 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 PLA2G5P39877 138 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 MRPS5P82675 430 aaKnown RBP15.96■□□□□ 0.15
PDE6D-204ENST00000477748 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
PDE6D-204ENST00000477748 KRT40Q6A162 431 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 RUFY4Q6ZNE9 571 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 CKAP2LQ8IYA6 745 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 MICALL1Q8N3F8 863 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 DBF4BQ8NFT6 615 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 GJA10Q969M2 543 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 MBOAT7Q96N66 472 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 CERS4Q9HA82 394 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
PDE6D-204ENST00000477748 MTCH2Q9Y6C9 303 aa15.96■□□□□ 0.15
PDE6D-204ENST00000477748 REV3LO60673 3130 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 LCHNA4D1U4 455 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 EPOPA6NHQ4 379 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 WDR64B1ANS9 1081 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 CHMP2AO43633 222 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 HBP1O60381 514 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 MMP1P03956 469 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 RPLP2P05387 115 aaKnown RBP15.95■□□□□ 0.14
PDE6D-204ENST00000477748 NR5A1Q13285 461 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 EARS2Q5JPH6 523 aaKnown RBP15.95■□□□□ 0.14
PDE6D-204ENST00000477748 FAM26DQ5JW98 314 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 MARCH8Q5T0T0 291 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 RSPH3Q86UC2 560 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 IL27Q8NEV9 243 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 ATP8B4Q8TF62 1192 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 TRAPPC12Q8WVT3 735 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 APBB2Q92870 758 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 ZBTB10Q96DT7 871 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 ASB2Q96Q27 587 aa15.95■□□□□ 0.14
PDE6D-204ENST00000477748 NAP1L4Q99733 375 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms