RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TSGA10Q9BZW7 698 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 ANKZF1Q9H8Y5 726 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 KCND2Q9NZV8 630 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 PCDHA13Q9Y5I0 950 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 WDR81Q562E7 1941 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 SLC16A3O15427 465 aaKnown RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 DHX15O43143 795 aaKnown RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 KCNA1Q09470 495 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 MSANTD4Q8NCY6 345 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 PARD6BQ9BYG5 372 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 PUF60Q9UHX1 559 aaKnown RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 UBIAD1Q9Y5Z9 338 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 UBE4BO95155 1302 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 FZD9O00144 591 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 PJA2O43164 708 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 AKAP3O75969 853 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 IPO7O95373 1038 aaKnown RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 NR3C1P04150 777 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 GMPSP49915 693 aaPredicted RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 APBA1Q02410 837 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 MUM1L1Q5H9M0 696 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 NACC1Q96RE7 527 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
NUP188-205ENST00000477069 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 MAP3K20Q9NYL2 800 aaKnown RBP12.66□□□□□ -0.38
NUP188-205ENST00000477069 ANO9A1A5B4 782 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 GCNT3O95395 438 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 VCAM1P19320 739 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 SPA17Q15506 151 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 MCF2L2Q86YR7 1114 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 SAMD3Q8N6K7 520 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 STRA6Q9BX79 667 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 POLD4Q9HCU8 107 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 KCNH7Q9NS40 1196 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 HACL1Q9UJ83 578 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 PPP1R9AQ9ULJ8 1098 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 SFI1A8K8P3 1242 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 ENC1O14682 589 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 TUBB4BP68371 445 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 CC2D1AQ6P1N0 951 aaPredicted RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 SYTL5Q8TDW5 730 aaPredicted RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 LXNQ9BS40 222 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 AGO4Q9HCK5 861 aaKnown RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 PLCB1Q9NQ66 1216 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 SEL1LQ9UBV2 794 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 ARMCX3Q9UH62 379 aaPredicted RBP12.65□□□□□ -0.38
NUP188-205ENST00000477069 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 RAB21Q9UL25 225 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 ODF2LQ9ULJ1 636 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 PAPPA2Q9BXP8 1791 aa12.65□□□□□ -0.38
NUP188-205ENST00000477069 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.39
NUP188-205ENST00000477069 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.39
NUP188-205ENST00000477069 KIF5AQ12840 1032 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 MAPK7Q13164 816 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 ITGB3BPQ13352 177 aaPredicted RBP12.65□□□□□ -0.39
NUP188-205ENST00000477069 MTMR2Q13614 643 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 SECISBP2LQ93073 1101 aaKnown RBP12.65□□□□□ -0.39
NUP188-205ENST00000477069 ZSWIM4Q9H7M6 989 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 PARVGQ9HBI0 331 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 RAVER2Q9HCJ3 691 aaKnown RBP12.65□□□□□ -0.39
NUP188-205ENST00000477069 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 AIPL1Q9NZN9 384 aa12.65□□□□□ -0.39
NUP188-205ENST00000477069 ARID2Q68CP9 1835 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 PPP1R37O75864 691 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 FAM13AO94988 1023 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
NUP188-205ENST00000477069 SERPING1P05155 500 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 POLR2FP61218 127 aaKnown RBP12.64□□□□□ -0.39
NUP188-205ENST00000477069 TKFCQ3LXA3 575 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 SFMBT2Q5VUG0 894 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 BANK1Q8NDB2 785 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 CRACR2AQ9BSW2 395 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 JADE2Q9NQC1 790 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 CAPN6Q9Y6Q1 641 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 LCTP09848 1927 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
NUP188-205ENST00000477069 CASP4P49662 377 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 RASSF7Q02833 373 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 GFPT1Q06210 699 aaPredicted RBP12.64□□□□□ -0.39
NUP188-205ENST00000477069 NBPF12Q5TAG4 269 aaPredicted RBP12.64□□□□□ -0.39
NUP188-205ENST00000477069 TMCO3Q6UWJ1 677 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 ZNF720Q7Z2F6 126 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 DAW1Q8N136 415 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 SLC35C1Q96A29 364 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 IKZF4Q9H2S9 585 aa12.64□□□□□ -0.39
NUP188-205ENST00000477069 METTL14Q9HCE5 456 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms