RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 LUC7L2Q9Y383 392 aaKnown RBP21.08■□□□□ 0.97
SYF2-204ENST00000476231 ATP8B1O43520 1251 aa21.08■□□□□ 0.96
SYF2-204ENST00000476231 KIF20AO95235 890 aa21.08■□□□□ 0.96
SYF2-204ENST00000476231 PPP2R3AQ06190 1150 aa21.08■□□□□ 0.96
SYF2-204ENST00000476231 ITGB3BPQ13352 177 aaPredicted RBP21.08■□□□□ 0.96
SYF2-204ENST00000476231 BMS1Q14692 1282 aaKnown RBP21.08■□□□□ 0.96
SYF2-204ENST00000476231 FIGNQ5HY92 759 aa21.08■□□□□ 0.96
SYF2-204ENST00000476231 MIER3Q7Z3K6 550 aa21.08■□□□□ 0.96
SYF2-204ENST00000476231 PURBQ96QR8 312 aaKnown RBP21.08■□□□□ 0.96
SYF2-204ENST00000476231 PCDHA2Q9Y5H9 948 aa21.08■□□□□ 0.96
SYF2-204ENST00000476231 SPDYE4A6NLX3 237 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 MAFGO15525 162 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 NR3C2P08235 984 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 TSR1Q2NL82 804 aaKnown RBP21.07■□□□□ 0.96
SYF2-204ENST00000476231 RABGGTAQ92696 567 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 TUBGCP2Q9BSJ2 902 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 FBXO40Q9UH90 709 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 LOXHD1Q8IVV2 1947 aa21.07■□□□□ 0.96
SYF2-204ENST00000476231 RNF225M0QZC1 329 aaPredicted RBP21.06■□□□□ 0.96
SYF2-204ENST00000476231 IRX3P78415 501 aaPredicted RBP21.06■□□□□ 0.96
SYF2-204ENST00000476231 NLRX1Q86UT6 975 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 RIOX2Q8IUF8 465 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 KRT222Q8N1A0 295 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 GPRASP2Q96D09 838 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 REEP2Q9BRK0 252 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 LZTFL1Q9NQ48 299 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 PKD2L1Q9P0L9 805 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 TTC26A0AVF1 554 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 DDX39AO00148 427 aaKnown RBP21.06■□□□□ 0.96
SYF2-204ENST00000476231 FGFR1OPO95684 399 aaKnown RBP21.06■□□□□ 0.96
SYF2-204ENST00000476231 RAD51AP2Q09MP3 1159 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 MEA1Q16626 185 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 LDLRAD1Q5T700 205 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 PIGOQ8TEQ8 1089 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 OPTNQ96CV9 577 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 ERGIC2Q96RQ1 377 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 TSG101Q99816 390 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 LXNQ9BS40 222 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 CDC23Q9UJX2 597 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 AGTPBP1Q9UPW5 1226 aa21.06■□□□□ 0.96
SYF2-204ENST00000476231 EPN1Q9Y6I3 576 aaPredicted RBP21.06■□□□□ 0.96
SYF2-204ENST00000476231 TESPA1A2RU30 521 aaPredicted RBP21.05■□□□□ 0.96
SYF2-204ENST00000476231 STAM2O75886 525 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 P4HBP07237 508 aaKnown RBP21.05■□□□□ 0.96
SYF2-204ENST00000476231 CACNB1Q02641 598 aaPredicted RBP21.05■□□□□ 0.96
SYF2-204ENST00000476231 LRRC41Q15345 812 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 RINT1Q6NUQ1 792 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 CREBRFQ8IUR6 639 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 CEP112Q8N8E3 955 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 INPP4AQ96PE3 977 aaPredicted RBP21.05■□□□□ 0.96
SYF2-204ENST00000476231 TTYH3Q9C0H2 523 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 KCND2Q9NZV8 630 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 BTBD7Q9P203 1132 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 A0A1W2PQJ5 194 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 UNCXA6NJT0 531 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 CLCN6P51797 869 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 CDK17Q00537 523 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 UTP14CQ5TAP6 766 aaKnown RBP21.05■□□□□ 0.96
SYF2-204ENST00000476231 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
SYF2-204ENST00000476231 GLIS3Q8NEA6 775 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 RUSC1Q9BVN2 902 aa21.05■□□□□ 0.96
SYF2-204ENST00000476231 PFASO15067 1338 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 CTAGE9A4FU28 777 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 TBCAO75347 108 aaKnown RBP21.04■□□□□ 0.96
SYF2-204ENST00000476231 NDUFA10O95299 355 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 ARHGAP25P42331 645 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 GABPB1Q06547 395 aaPredicted RBP21.04■□□□□ 0.96
SYF2-204ENST00000476231 C1orf186Q6ZWK4 172 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 DNERQ8NFT8 737 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 GOLGA1Q92805 767 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 CNOT6LQ96LI5 555 aaKnown RBP21.04■□□□□ 0.96
SYF2-204ENST00000476231 ASCC2Q9H1I8 757 aaPredicted RBP21.04■□□□□ 0.96
SYF2-204ENST00000476231 ZHX3Q9H4I2 956 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 ZSWIM4Q9H7M6 989 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 ZNF446Q9NWS9 450 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 WRAP73Q9P2S5 460 aaPredicted RBP21.04■□□□□ 0.96
SYF2-204ENST00000476231 TCEAL9Q9UHQ7 104 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 CLEC11AQ9Y240 323 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 COL4A3BPQ9Y5P4 624 aa21.04■□□□□ 0.96
SYF2-204ENST00000476231 GAP43P17677 238 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 SFNP31947 248 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 ZBED6P86452 979 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 KRT76Q01546 638 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 TBC1D8BQ0IIM8 1120 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 SRGAP1Q7Z6B7 1085 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 CCDC170Q8IYT3 715 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 BANK1Q8NDB2 785 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 CDHR1Q96JP9 859 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 IWS1Q96ST2 819 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 SPATC1LQ9H0A9 340 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 HAUS4Q9H6D7 363 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 TBC1D7Q9P0N9 293 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 ZRANB2O95218 330 aaKnown RBP eCLIP21.03■□□□□ 0.96
SYF2-204ENST00000476231 PRKCSHP14314 528 aaPredicted RBP21.03■□□□□ 0.96
SYF2-204ENST00000476231 ZSCAN20P17040 1043 aaPredicted RBP21.03■□□□□ 0.96
SYF2-204ENST00000476231 JAK3P52333 1124 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 HERVK_113P62684 666 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 ZCWPW2Q504Y3 356 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 ZNF569Q5MCW4 686 aa21.03■□□□□ 0.96
SYF2-204ENST00000476231 TMCO3Q6UWJ1 677 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms