RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
TVP23B-202ENST00000476139 SLC9A1P19634 815 aa18.31■□□□□ 0.52
TVP23B-202ENST00000476139 RASSF7Q02833 373 aa18.31■□□□□ 0.52
TVP23B-202ENST00000476139 C1orf186Q6ZWK4 172 aa18.31■□□□□ 0.52
TVP23B-202ENST00000476139 TRERF1Q96PN7 1200 aa18.31■□□□□ 0.52
TVP23B-202ENST00000476139 UBXN6Q9BZV1 441 aa18.31■□□□□ 0.52
TVP23B-202ENST00000476139 CCPG1Q9ULG6 757 aa18.31■□□□□ 0.52
TVP23B-202ENST00000476139 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
TVP23B-202ENST00000476139 ZBTB7AO95365 584 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 LCA5LO95447 670 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 ITGB5P18084 799 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 CYP2C19P33261 490 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 EPS15P42566 896 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 PTGER2P43116 358 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 MYCT1Q8N699 235 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 EHBP1Q8NDI1 1231 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 HOMER2Q9NSB8 354 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 ASTN1O14525 1302 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 ATP8B1O43520 1251 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 MAGEA1P43355 309 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 MRPS25P82663 173 aaKnown RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 TRAF1Q13077 416 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 PIM2Q9P1W9 311 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 PPP1R1BQ9UD71 204 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 ARMCX3Q9UH62 379 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 DCAF17Q5H9S7 520 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-202ENST00000476139 SFMBT2Q5VUG0 894 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 CIAPIN1Q6FI81 312 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 IL31RAQ8NI17 732 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 STK24Q9Y6E0 443 aa18.3■□□□□ 0.52
TVP23B-202ENST00000476139 PSME4Q14997 1843 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 PDE2AO00408 941 aaPredicted RBP18.29■□□□□ 0.52
TVP23B-202ENST00000476139 PDXKO00764 312 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 USO1O60763 962 aaKnown RBP18.29■□□□□ 0.52
TVP23B-202ENST00000476139 PRELPP51888 382 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 MAP3K10Q02779 954 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 MSANTD4Q8NCY6 345 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 PSMB7Q99436 277 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 WDR11Q9BZH6 1224 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 TUFT1Q9NNX1 390 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 FAM184BQ9ULE4 1060 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 PLA2G6O60733 806 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 NR3C1P04150 777 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 RAPGEF1Q13905 1077 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 TEPSINQ96N21 525 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 EDEM3Q9BZQ6 932 aa18.29■□□□□ 0.52
TVP23B-202ENST00000476139 BUB1O43683 1085 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 COG2Q14746 738 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 TCERG1LQ5VWI1 586 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 HOOK2Q96ED9 719 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 RAB21Q9UL25 225 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 MAP2K7O14733 419 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 FAM13AO94988 1023 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 ICAM1P05362 532 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 TRMT1LQ7Z2T5 733 aaKnown RBP18.28■□□□□ 0.52
TVP23B-202ENST00000476139 TSGA10Q9BZW7 698 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 RAVER2Q9HCJ3 691 aaKnown RBP18.28■□□□□ 0.52
TVP23B-202ENST00000476139 VPS18Q9P253 973 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 L1RE1Q9UN81 338 aa18.28■□□□□ 0.52
TVP23B-202ENST00000476139 CALUO43852 315 aaPredicted RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 DPY19L2P1Q6NXN4 242 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 MAEAQ7L5Y9 396 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 FRMD5Q7Z6J6 570 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 CLEC4DQ8WXI8 215 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 GANQ9H2C0 597 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 KCNH7Q9NS40 1196 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 TYW1Q9NV66 732 aaKnown RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 ALAS1P13196 640 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 CXCR5P32302 372 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 HDXQ7Z353 690 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 GSPT2Q8IYD1 628 aaKnown RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 PRPF38AQ8NAV1 312 aaKnown RBP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 SH2D3AQ9BRG2 576 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 MXRA8Q9BRK3 442 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 LXNQ9BS40 222 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.27■□□□□ 0.52
TVP23B-202ENST00000476139 OLFML3Q9NRN5 406 aa18.27■□□□□ 0.52
TVP23B-202ENST00000476139 SSU72P8A0A1W2PR75 194 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 SERPING1P05155 500 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 BAG6P46379 1132 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 BMT2Q1RMZ1 405 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 MUM1L1Q5H9M0 696 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms