RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CC2D1AQ6P1N0 951 aaPredicted RBP9.27□□□□□ -0.93
SMC5-203ENST00000475540 BORAQ6PGQ7 559 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 HIPK4Q8NE63 616 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 WDR48Q8TAF3 677 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 DDX1Q92499 740 aaKnown RBP9.27□□□□□ -0.93
SMC5-203ENST00000475540 TEPSINQ96N21 525 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 BARX1Q9HBU1 254 aaPredicted RBP9.27□□□□□ -0.93
SMC5-203ENST00000475540 BTBD7Q9P203 1132 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 B4GALT6Q9UBX8 382 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 ZKSCAN5Q9Y2L8 839 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 A0A0G2JLL6 359 aaPredicted RBP9.26□□□□□ -0.93
SMC5-203ENST00000475540 H0Y858 1186 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 CBX4O00257 560 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 COL6A1P12109 1028 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 NFIXQ14938 502 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 ZNF174Q15697 407 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 TM4SF20Q53R12 229 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 LILRA6Q6PI73 481 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 AHI1Q8N157 1196 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 ASB15Q8WXK1 588 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 KRTAP4-9Q9BYQ8 210 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 ADAM7Q9H2U9 754 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 UCKL1Q9NWZ5 548 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 ZDHHC9Q9Y397 364 aa9.26□□□□□ -0.93
SMC5-203ENST00000475540 H7C1D1 291 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 POU3F2P20265 443 aaPredicted RBP9.25□□□□□ -0.93
SMC5-203ENST00000475540 KIF11P52732 1056 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 NFATC3Q12968 1075 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 PLEKHG4Q58EX7 1191 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 UBXN11Q5T124 520 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 ZFYVE27Q5T4F4 411 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 KIF18BQ86Y91 864 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 LGI4Q8N135 537 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 KLHL36Q8N4N3 616 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 MFSD3Q96ES6 412 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 ACSS2Q9NR19 701 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 IFT57Q9NWB7 429 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 ASB1Q9Y576 335 aa9.25□□□□□ -0.93
SMC5-203ENST00000475540 PRAMEF22A3QJZ6 481 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 KPNA6O60684 536 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 KLHL18O94889 574 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 MC4RP32245 332 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 NUDT10Q8NFP7 164 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 NUDT11Q96G61 164 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 ORAI3Q9BRQ5 295 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 PCIF1Q9H4Z3 704 aa9.24□□□□□ -0.93
SMC5-203ENST00000475540 RASSF10A6NK89 507 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 GOLGA6L22H0YM25 854 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 ECE1P42892 770 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 WDR72Q3MJ13 1102 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 CATSPEREQ5SY80 951 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 ERICH6BQ5W0A0 696 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 SDE2Q6IQ49 451 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 PPM1KQ8N3J5 372 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 ERCC4Q92889 916 aaPredicted RBP9.23□□□□□ -0.93
SMC5-203ENST00000475540 RELTQ969Z4 430 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 BTBD2Q9BX70 525 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 SLKQ9H2G2 1235 aaPredicted RBP9.23□□□□□ -0.93
SMC5-203ENST00000475540 DUSP10Q9Y6W6 482 aa9.23□□□□□ -0.93
SMC5-203ENST00000475540 GAS7O60861 476 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 CLSTN1O94985 981 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 CYP17A1P05093 508 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 HSD3B2P26439 372 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 CNR2P34972 360 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 GYS2P54840 703 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 Q6ZUG5 572 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 CXXC5Q7LFL8 322 aaKnown RBP9.22□□□□□ -0.93
SMC5-203ENST00000475540 CALML6Q8TD86 181 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 AMNQ9BXJ7 453 aa9.22□□□□□ -0.93
SMC5-203ENST00000475540 MPIG6BO95866 241 aa9.21□□□□□ -0.94
SMC5-203ENST00000475540 FNTBP49356 437 aa9.21□□□□□ -0.94
SMC5-203ENST00000475540 KIAA1958Q8N8K9 716 aa9.21□□□□□ -0.94
SMC5-203ENST00000475540 E2F7Q96AV8 911 aa9.21□□□□□ -0.94
SMC5-203ENST00000475540 TARS2Q9BW92 718 aaKnown RBP9.21□□□□□ -0.94
SMC5-203ENST00000475540 ADAM29Q9UKF5 820 aa9.21□□□□□ -0.94
SMC5-203ENST00000475540 DVL2O14641 736 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 PRICKLE3O43900 615 aaPredicted RBP9.2□□□□□ -0.94
SMC5-203ENST00000475540 IGSF3O75054 1194 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 F2P00734 622 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 POLD1P28340 1107 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 IL13RA1P78552 427 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 SART3Q15020 963 aaKnown RBP9.2□□□□□ -0.94
SMC5-203ENST00000475540 PCBP1Q15365 356 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMC5-203ENST00000475540 PLEKHH3Q7Z736 793 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 KBTBD2Q8IY47 623 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 MBD6Q96DN6 1003 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 INVSQ9Y283 1065 aa9.2□□□□□ -0.94
SMC5-203ENST00000475540 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 CUTAO60888 179 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 MYCLP1P12525 358 aaPredicted RBP9.19□□□□□ -0.94
SMC5-203ENST00000475540 SCNN1BP51168 640 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 STILQ15468 1287 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 SURF1Q15526 300 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 LRSAM1Q6UWE0 723 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 REXO1L1PQ8IX06 675 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 NXPE1Q8N323 547 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 CXorf38Q8TB03 319 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms