RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PYROXD1Q8WU10 500 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 MCAMP43121 646 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 ZBED1O96006 694 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 PSPC1Q8WXF1 523 aaKnown RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 FMO2Q99518 471 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 RAVER2Q9HCJ3 691 aaKnown RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 ANLNQ9NQW6 1124 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 ADAMTS1Q9UHI8 967 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 GOLGA8MH3BSY2 632 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 NDUFA10O95299 355 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 SYNE4Q8N205 404 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 TDRD3Q9H7E2 651 aaKnown RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 GINM1Q9NU53 330 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 ADGRL2O95490 1459 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 NMT2O60551 498 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 EPHB4P54760 987 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 ZBTB41Q5SVQ8 909 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 PIP4K2CQ8TBX8 421 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 NDST4Q9H3R1 872 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 CDR2Q01850 454 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 TRIM67Q6ZTA4 783 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 TDRD7Q8NHU6 1098 aaKnown RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.8□□□□□ -0.52
VAPB-204ENST00000475243 PBKQ96KB5 322 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 TSR3Q9UJK0 312 aaKnown RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 EVI5O60447 810 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 NPR1P16066 1061 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 EEF1B2P24534 225 aaKnown RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 MTMR1Q13613 665 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 NOVA2Q9UNW9 492 aaKnown RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 HEY1Q9Y5J3 304 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 HDLBPQ00341 1268 aaKnown RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 NSUN2Q08J23 767 aaKnown RBP eCLIP11.79□□□□□ -0.52
VAPB-204ENST00000475243 TRMT10CQ7L0Y3 403 aaKnown RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 SCN4BQ8IWT1 228 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 KRT82Q9NSB4 513 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 SASH1O94885 1247 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 STMN1P16949 149 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 DR1Q01658 176 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 YWHAHQ04917 246 aaPredicted RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 SMAD1Q15797 465 aaKnown RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 ARMCX2Q7L311 632 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 FAF2Q96CS3 445 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 CCDC138Q96M89 665 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 GRAPQ13588 217 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 LCA5Q86VQ0 697 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 EFCAB13Q8IY85 973 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
VAPB-204ENST00000475243 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 GOLGA8QA0A0J9YX86 632 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 GOLGA8OA6NCC3 632 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 GOLGA8NF8WBI6 632 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 ATP1A3P13637 1013 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 IFNAR1P17181 557 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 TTLL6Q8N841 843 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 ATP8B3O60423 1300 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 OCRLQ01968 901 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
VAPB-204ENST00000475243 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 IKBKBO14920 756 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 ARL13BQ3SXY8 428 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 FAM81BQ96LP2 452 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 HEMGNQ9BXL5 484 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 POTEMA6NI47 508 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 CRKP46108 304 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 CLDN3O15551 220 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 ANAPC7Q9UJX3 599 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 FAF1Q9UNN5 650 aaPredicted RBP11.78□□□□□ -0.52
VAPB-204ENST00000475243 CFAP74Q9C0B2 1584 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 ZNF772Q68DY9 489 aaPredicted RBP11.78□□□□□ -0.52
VAPB-204ENST00000475243 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 TTC25Q96NG3 672 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
VAPB-204ENST00000475243 SUCLA2Q9P2R7 463 aaPredicted RBP11.78□□□□□ -0.52
VAPB-204ENST00000475243 SLC8A2Q9UPR5 921 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 KRT31Q15323 416 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 TEX2Q8IWB9 1127 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms