RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 CLUL1Q15846 466 aa28.43■■■□□ 2.14
TMEM54-205ENST00000475208 CEP55Q53EZ4 464 aa28.43■■■□□ 2.14
TMEM54-205ENST00000475208 CMTR2Q8IYT2 770 aaKnown RBP28.43■■■□□ 2.14
TMEM54-205ENST00000475208 AGO4Q9HCK5 861 aaKnown RBP28.43■■■□□ 2.14
TMEM54-205ENST00000475208 ALG13Q9NP73 1137 aaKnown RBP28.43■■■□□ 2.14
TMEM54-205ENST00000475208 PADI3Q9ULW8 664 aa28.43■■■□□ 2.14
TMEM54-205ENST00000475208 IGSF9BQ9UPX0 1349 aa28.43■■■□□ 2.14
TMEM54-205ENST00000475208 DCXO43602 365 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 FOSP01100 380 aaPredicted RBP28.42■■■□□ 2.14
TMEM54-205ENST00000475208 DLX2Q07687 328 aaPredicted RBP28.42■■■□□ 2.14
TMEM54-205ENST00000475208 RTN1Q16799 776 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 RNF20Q5VTR2 975 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 TEX2Q8IWB9 1127 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 ADHFE1Q8IWW8 467 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 CRIPAKQ8N1N5 446 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 CELF4Q9BZC1 486 aaKnown RBP28.42■■■□□ 2.14
TMEM54-205ENST00000475208 PLAGL2Q9UPG8 496 aa28.42■■■□□ 2.14
TMEM54-205ENST00000475208 C19orf67A6NJJ6 358 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 GTF2F1P35269 517 aaKnown RBP eCLIP28.41■■■□□ 2.14
TMEM54-205ENST00000475208 FUT2Q10981 343 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 PAN2Q504Q3 1202 aaKnown RBP28.41■■■□□ 2.14
TMEM54-205ENST00000475208 P2RX5Q93086 422 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 TCEANC2Q96MN5 208 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 NEK1Q96PY6 1258 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 IGFLR1Q9H665 355 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 KIAA1671Q9BY89 1806 aa28.41■■■□□ 2.14
TMEM54-205ENST00000475208 SMIM35A0A1B0GVV1 85 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 STXBP3O00186 592 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 ZBTB43O43298 467 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 TBX10O75333 385 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 STAG3L1P0CL83 205 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 SCG2P13521 617 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 CAMK1Q14012 370 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 MTHFD1LQ6UB35 978 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 UIMC1Q96RL1 719 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 TMEM260Q9NX78 707 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 BRPF3Q9ULD4 1205 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 V9GY48 417 aaPredicted RBP28.4■■■□□ 2.14
TMEM54-205ENST00000475208 KDM3AQ9Y4C1 1321 aa28.4■■■□□ 2.14
TMEM54-205ENST00000475208 MEIS1O00470 390 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 MBTPS2O43462 519 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 ATG7O95352 703 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 SREBF1P36956 1147 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 KRT76Q01546 638 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 AP3B2Q13367 1082 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 SMAD2Q15796 467 aaKnown RBP28.39■■■□□ 2.14
TMEM54-205ENST00000475208 CSPP1Q1MSJ5 1256 aa28.39■■■□□ 2.14
TMEM54-205ENST00000475208 LOXHD1Q8IVV2 1947 aa28.39■■■□□ 2.13
TMEM54-205ENST00000475208 SMCO2A6NFE2 343 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 hCG_1984214I3L0E3 225 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 DDX39AO00148 427 aaKnown RBP28.38■■■□□ 2.13
TMEM54-205ENST00000475208 LINC01565O15544 149 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 ITGB1P05556 798 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 SLC26A2P50443 739 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 EXOSC10Q01780 885 aaKnown RBP28.38■■■□□ 2.13
TMEM54-205ENST00000475208 TMEM266Q2M3C6 531 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 NAALADL2Q58DX5 795 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 NME8Q8N427 588 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 ZNF713Q8N859 430 aaPredicted RBP28.38■■■□□ 2.13
TMEM54-205ENST00000475208 TMX1Q9H3N1 280 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 BARHL2Q9NY43 387 aa28.38■■■□□ 2.13
TMEM54-205ENST00000475208 IGKV6D-21A0A0A0MT36 114 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 GOLGA8AA7E2F4 631 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 GOLGA8BA8MQT2 603 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 BACH1O14867 736 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 CCNE2O96020 404 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 IBSPP21815 317 aaPredicted RBP28.37■■■□□ 2.13
TMEM54-205ENST00000475208 DNAJB1P25685 340 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 ZNF76P36508 570 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 CLK2P49760 499 aaKnown RBP28.37■■■□□ 2.13
TMEM54-205ENST00000475208 GATMP50440 423 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 SMAD4Q13485 552 aaKnown RBP28.37■■■□□ 2.13
TMEM54-205ENST00000475208 DHX32Q7L7V1 743 aaKnown RBP28.37■■■□□ 2.13
TMEM54-205ENST00000475208 KLHL23Q8NBE8 558 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 SPPL3Q8TCT6 385 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 LRFN2Q9ULH4 789 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 GINS2Q9Y248 185 aa28.37■■■□□ 2.13
TMEM54-205ENST00000475208 HBP1O60381 514 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 KLRC1P26715 233 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 IRS1P35568 1242 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 NFX1Q12986 1120 aaKnown RBP28.36■■■□□ 2.13
TMEM54-205ENST00000475208 FAM160B1Q5W0V3 765 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 NIPA1Q7RTP0 329 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 ATP8B4Q8TF62 1192 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 PPP2R3CQ969Q6 453 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 GLT8D2Q9H1C3 349 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 CD207Q9UJ71 328 aa28.36■■■□□ 2.13
TMEM54-205ENST00000475208 MUC6Q6W4X9 2439 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 NDUFV1P49821 464 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 ADAM15Q13444 863 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 ABHD15Q6UXT9 468 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 ADGRD2Q7Z7M1 963 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 CCDC60Q8IWA6 550 aaPredicted RBP28.35■■■□□ 2.13
TMEM54-205ENST00000475208 POP1Q99575 1024 aaKnown RBP28.35■■■□□ 2.13
TMEM54-205ENST00000475208 UPF3BQ9BZI7 483 aaKnown RBP28.35■■■□□ 2.13
TMEM54-205ENST00000475208 ERVK-5Q9HDB9 667 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 C5orf42Q9H799 3197 aa28.35■■■□□ 2.13
TMEM54-205ENST00000475208 KLF18A0A0U1RQI7 1052 aa28.34■■■□□ 2.13
TMEM54-205ENST00000475208 SARSP49591 514 aaKnown RBP28.34■■■□□ 2.13
TMEM54-205ENST00000475208 ADCK5Q3MIX3 580 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms