RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
RPGR-206ENST00000474584 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.06
RPGR-206ENST00000474584 PGRMC1O00264 195 aaKnown RBP15.39■□□□□ 0.05
RPGR-206ENST00000474584 PDXKO00764 312 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 RAD21O60216 631 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 CEP104O60308 925 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 ADRA2BP18089 450 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 RPL13P26373 211 aaKnown RBP15.39■□□□□ 0.05
RPGR-206ENST00000474584 PON1P27169 355 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 LSP1P33241 339 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 PRKCIP41743 596 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 GIT2Q14161 759 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 ALKBH5Q6P6C2 394 aaKnown RBP15.39■□□□□ 0.05
RPGR-206ENST00000474584 SFR1Q86XK3 245 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 CATSPER3Q86XQ3 398 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 REEP2Q9BRK0 252 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
RPGR-206ENST00000474584 PLAAQ9Y263 795 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 SAMM50Q9Y512 469 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
RPGR-206ENST00000474584 TBX3O15119 743 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 PABPC4Q13310 644 aaKnown RBP eCLIP15.38■□□□□ 0.05
RPGR-206ENST00000474584 CEP85LQ5SZL2 805 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 MCTP2Q6DN12 878 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 SYT2Q8N9I0 419 aaPredicted RBP15.38■□□□□ 0.05
RPGR-206ENST00000474584 LRRC57Q8N9N7 239 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 LMBR1Q8WVP7 490 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 LRRC45Q96CN5 670 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 EPN3Q9H201 632 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 FBXL5Q9UKA1 691 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 KIAA0754O94854 1291 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 SERPINB2P05120 415 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 RPA1P27694 616 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 INPP5BP32019 993 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 LIG3P49916 1009 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 ARHGAP4P98171 946 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 TRADDQ15628 312 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 PRR16Q569H4 304 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 LRIG3Q6UXM1 1119 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 EPM2AIP1Q7L775 607 aaPredicted RBP15.38■□□□□ 0.05
RPGR-206ENST00000474584 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 CCDC17Q96LX7 622 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 C8orf37Q96NL8 207 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.05
RPGR-206ENST00000474584 COA1Q9GZY4 146 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 TYW1Q9NV66 732 aaKnown RBP15.38■□□□□ 0.05
RPGR-206ENST00000474584 ADAMTSL1Q8N6G6 1762 aa15.38■□□□□ 0.05
RPGR-206ENST00000474584 TMCO5BA8MYB1 307 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 CCDC188H7C350 402 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 SLC16A3O15427 465 aaKnown RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 PPP1R37O75864 691 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 NR3C1P04150 777 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 GUCY1A3Q02108 690 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 DPY19L2P1Q6NXN4 242 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 MICALCLQ6ZW33 695 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 SYCE1Q8N0S2 351 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 TPCN2Q8NHX9 752 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 DCAF4Q8WV16 495 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 GCNT4Q9P109 453 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 NOC2LQ9Y3T9 749 aaKnown RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 A0A0A6YYK5 440 aaPredicted RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 MEIS1O00470 390 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 TBCAO75347 108 aaKnown RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 AKAP3O75969 853 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 HOXA10P31260 410 aaPredicted RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 EPHA7Q15375 998 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 ICE2Q659A1 982 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 ARFGAP2Q8N6H7 521 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 RBM46Q8TBY0 533 aaKnown RBP15.37■□□□□ 0.05
RPGR-206ENST00000474584 GOLPH3Q9H4A6 298 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 UBR3Q6ZT12 1888 aa15.37■□□□□ 0.05
RPGR-206ENST00000474584 GCOM1H8Y6P7 765 aaPredicted RBP15.36■□□□□ 0.05
RPGR-206ENST00000474584 MEIS2O14770 477 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 RIMBP2O15034 1052 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 H2AFZP0C0S5 128 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 MYZAPP0CAP1 466 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 PSMC6P62333 389 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 BMT2Q1RMZ1 405 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 Q4G0T1 1027 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 FAM182BQ5T319 152 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 H2AFVQ71UI9 128 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 CRAMP1Q96RY5 1269 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 INTUQ9ULD6 942 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 KRIT1O00522 736 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 SART1O43290 800 aaKnown RBP15.36■□□□□ 0.05
RPGR-206ENST00000474584 GCNT3O95395 438 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 HOXD13P35453 343 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 HSD17B3P37058 310 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
RPGR-206ENST00000474584 JAM2P57087 298 aa15.36■□□□□ 0.05
RPGR-206ENST00000474584 ITGB3BPQ13352 177 aaPredicted RBP15.36■□□□□ 0.05
RPGR-206ENST00000474584 PTGISQ16647 500 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms