RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 TGFB2P61812 414 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 LSM12Q3MHD2 195 aaKnown RBP5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 C1orf210Q8IVY1 113 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 PLA2G12BQ9BX93 195 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 MAN2B1O00754 1011 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 PYGMP11217 842 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 JAM2P57087 298 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 IL13RA1P78552 427 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 PTH1RQ03431 593 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 PAK1Q13153 545 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 SF3A1Q15459 793 aaKnown RBP5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 DPP8Q6V1X1 898 aaPredicted RBP5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 SPATC1Q76KD6 591 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 ZNF808Q8N4W9 903 aaPredicted RBP5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 IL17DQ8TAD2 202 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 TANGO6Q9C0B7 1094 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 CBLCQ9ULV8 474 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 SRPK3Q9UPE1 567 aa5.56□□□□□ -1.52
TMEM50B-208ENST00000474272 CUTAO60888 179 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 ABHD18Q0P651 414 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 DUSP8Q13202 625 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 LRSAM1Q6UWE0 723 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 POLNQ7Z5Q5 900 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 MTDHQ86UE4 582 aaKnown RBP5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 PCDH19Q8TAB3 1148 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 CHFRQ96EP1 664 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 PLEKHG4BQ96PX9 1271 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 ZDHHC5Q9C0B5 715 aa5.55□□□□□ -1.52
TMEM50B-208ENST00000474272 PRAMEF25A6NGN4 478 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 HMGCRP04035 888 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 PTGS1P23219 599 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 MSX2P35548 267 aaPredicted RBP5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 ETV4P43268 484 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 FOXL1Q12952 345 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 GPR19Q15760 415 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 ZMAT1Q5H9K5 638 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 FAM209AQ5JX71 171 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 FOXB2Q5VYV0 432 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 MAMDC4Q6UXC1 1216 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 NLGN4XQ8N0W4 816 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 LRRC47Q8N1G4 583 aaKnown RBP5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 ST13P5Q8NFI4 369 aaPredicted RBP5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 CFHR4Q92496 578 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 SPATA9Q9BWV2 254 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 IKZF4Q9H2S9 585 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 INCENPQ9NQS7 918 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 UCKL1Q9NWZ5 548 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 USP35Q9P2H5 1018 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 C11orf21Q9P2W6 132 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 PFDN2Q9UHV9 154 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 ATP23Q9Y6H3 246 aa5.54□□□□□ -1.52
TMEM50B-208ENST00000474272 ARHGAP6O43182 974 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 C4BPAP04003 597 aaKnown RBP5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 CD83Q01151 205 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 GUCY1A3Q02108 690 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 RAB33AQ14088 237 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 SEC23AQ15436 765 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 EP400NLQ6ZTU2 488 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 FILIP1Q7Z7B0 1213 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 OR14K1Q8NGZ2 314 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 NEU4Q8WWR8 484 aaPredicted RBP5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 FBXW5Q969U6 566 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 TMEM176AQ96HP8 235 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 DRC1Q96MC2 740 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 AMNQ9BXJ7 453 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 GALNT8Q9NY28 637 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 BTBD7Q9P203 1132 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 PCDHA9Q9Y5H5 950 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 SLC30A1Q9Y6M5 507 aa5.53□□□□□ -1.52
TMEM50B-208ENST00000474272 CCDC85CA6NKD9 419 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 HIBADHP31937 336 aaKnown RBP5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 DNM2P50570 870 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 PCOLCEQ15113 449 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 OTOP2Q7RTS6 562 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 GPR135Q8IZ08 494 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 FAM89AQ96GI7 184 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 SCYL1Q96KG9 808 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 CDC6Q99741 560 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 TLR9Q9NR96 1032 aa5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 HECAQ9UBI9 543 aaPredicted RBP5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 PUF60Q9UHX1 559 aaKnown RBP5.52□□□□□ -1.53
TMEM50B-208ENST00000474272 ADCY3O60266 1144 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 MPIG6BO95866 241 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 C6orf222P0C671 652 aaPredicted RBP5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 ATP2B1P20020 1258 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 AOAHP28039 575 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 MRE11P49959 708 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 ST5P78524 1137 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 NFYCQ13952 458 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 FNDC7Q5VTL7 733 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 FSTL4Q6MZW2 842 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 USP30Q70CQ3 517 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 SCUBE1Q8IWY4 988 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 PTPRN2Q92932 1015 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 CEP89Q96ST8 783 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 SMURF1Q9HCE7 757 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 PLA2G3Q9NZ20 509 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 PPP1R1BQ9UD71 204 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms