RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 MFAP1P55081 439 aaKnown RBP5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 ARHGAP4P98171 946 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 MGAT3Q09327 533 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 BTG3Q14201 252 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 NEDD9Q14511 834 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 LPIN1Q14693 890 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 CBX2Q14781 532 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 GNPTABQ3T906 1256 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 FBXO47Q5MNV8 452 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 RUFY4Q6ZNE9 571 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 CYFIP1Q7L576 1253 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 ADGRD2Q7Z7M1 963 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 FCHSD1Q86WN1 690 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 HOMER1Q86YM7 354 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 CRIPAKQ8N1N5 446 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 P2RX5Q93086 422 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 PBXIP1Q96AQ6 731 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 IGFLR1Q9H665 355 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 CLEC1BQ9P126 229 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 MAD2L2Q9UI95 211 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 ZNF215Q9UL58 517 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 PLAGL2Q9UPG8 496 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 MRPL42Q9Y6G3 142 aaKnown RBP5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 NRCAMQ92823 1304 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 KMT2EQ8IZD2 1858 aa5.94□□□□□ -1.46
SNRNP40-204ENST00000474025 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 PPP1R3GB7ZBB8 358 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 ENPP3O14638 875 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 FIBPO43427 364 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 CYTH3O43739 400 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 STAM2O75886 525 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 ITGB1P05556 798 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 SDSP20132 328 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 VCPP55072 806 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 RRP1P56182 461 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 ZXDAP98168 799 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 COASYQ13057 564 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 SEC23AQ15436 765 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 IFIT1BQ5T764 474 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 UTP14CQ5TAP6 766 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 TYW1BQ6NUM6 668 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 TAF2Q6P1X5 1199 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 TSHZ1Q6ZSZ6 1077 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 FBXL6Q8N531 539 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 EFHBQ8N7U6 833 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 SPPL3Q8TCT6 385 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 PPP2R3CQ969Q6 453 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 PIGSQ96S52 555 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 SENP7Q9BQF6 1050 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 UBAC1Q9BSL1 405 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 KRT23Q9C075 422 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 RIOX1Q9H6W3 641 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 TUBE1Q9UJT0 475 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 BARX2Q9UMQ3 279 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 USP15Q9Y4E8 981 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 PCDHGC5Q9Y5F6 944 aa5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 BAZ2BQ9UIF8 2168 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-204ENST00000474025 KIAA1671Q9BY89 1806 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 DOCK5Q9H7D0 1870 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 EPG5Q9HCE0 2579 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 PNMA6FA0A0J9YX94 578 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 MBLAC1A4D2B0 266 aaPredicted RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 MARK3P27448 753 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 CD52P31358 61 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 NRIP1P48552 1158 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 MRPS6P82932 125 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 SP4Q02446 784 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 SIGLEC14Q08ET2 396 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 TRAF1Q13077 416 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 PPFIA1Q13136 1202 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 HDAC1Q13547 482 aaPredicted RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 GRM4Q14833 912 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 GRIK4Q16099 956 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 IMMTQ16891 758 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 PAN2Q504Q3 1202 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 NAALADL2Q58DX5 795 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 MARCH8Q5T0T0 291 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 CWC27Q6UX04 472 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 CYB5R4Q7L1T6 521 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 RSPH3Q86UC2 560 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 NPAS4Q8IUM7 802 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 CMTR2Q8IYT2 770 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 KLHL23Q8NBE8 558 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 VN1R2Q8NFZ6 395 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 POF1BQ8WVV4 589 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 DNAJB3Q8WWF6 145 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 SUSD6Q92537 303 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 RILPL2Q969X0 211 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 ASIC4Q96FT7 647 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 DSCC1Q9BVC3 393 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 PHF7Q9BWX1 381 aaPredicted RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 LNPKQ9C0E8 428 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 AGO3Q9H9G7 860 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 FAM86C1Q9NVL1 165 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 RTEL1Q9NZ71 1219 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 CDY2AQ9Y6F7 541 aa5.92□□□□□ -1.46
SNRNP40-204ENST00000474025 EP300Q09472 2414 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 NCOR2Q9Y618 2525 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 PROB1E7EW31 1015 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms