RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 HDAC9Q9UKV0 1011 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 MYO3BQ8WXR4 1341 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 OPLAHO14841 1288 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 UCHL3P15374 230 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 GUCY2CP25092 1073 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 PON1P27169 355 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 ARHGAP4P98171 946 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 EPM2AIP1Q7L775 607 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-214ENST00000473778 SH3BP5LQ7L8J4 393 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 IQCKQ8N0W5 287 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 IFT81Q8WYA0 676 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 RUBCNQ92622 972 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 COA1Q9GZY4 146 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 ASTN1O14525 1302 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
C9orf3-214ENST00000473778 FAM170AA1A519 330 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 RAD51CO43502 376 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 GNA14O95837 355 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 ECHS1P30084 290 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 USP11P51784 963 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 GUCY2FP51841 1108 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 JAG1P78504 1218 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 CYP4A11Q02928 519 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 SP8Q8IXZ3 490 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 OLIG1Q8TAK6 271 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 NUCKS1Q9H1E3 243 aaKnown RBP12□□□□□ -0.49
C9orf3-214ENST00000473778 SIX2Q9NPC8 291 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 TMEM59LQ9UK28 342 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 KRT18P05783 430 aaKnown RBP12□□□□□ -0.49
C9orf3-214ENST00000473778 EPB41P11171 864 aaKnown RBP12□□□□□ -0.49
C9orf3-214ENST00000473778 CCT5P48643 541 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 CORO7P57737 925 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 ASIC2Q16515 512 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 USH1GQ495M9 461 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 LRRC57Q8N9N7 239 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 USP38Q8NB14 1042 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 ZNF622Q969S3 477 aaKnown RBP eCLIP12□□□□□ -0.49
C9orf3-214ENST00000473778 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
C9orf3-214ENST00000473778 RUSC1Q9BVN2 902 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 CAPS2Q9BXY5 557 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 TRAF3IP3Q9Y228 551 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 PITPNM2Q9BZ72 1349 aa12□□□□□ -0.49
C9orf3-214ENST00000473778 SFI1A8K8P3 1242 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 CETN3O15182 167 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 GNGT1P63211 74 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 PPFIA1Q13136 1202 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 KNOP1Q1ED39 458 aaKnown RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 GLE1Q53GS7 698 aaKnown RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 SLFN13Q68D06 897 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 SYT2Q8N9I0 419 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 NAGPAQ9UK23 515 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 GOLGA8KD6RF30 607 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 EML1O00423 815 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 ZBTB39O15060 712 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 CLIC2O15247 247 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 EIF3HO15372 352 aaKnown RBP eCLIP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 RPA1P27694 616 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 HOXA7P31268 230 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 HOXA13P31271 388 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 ATP1A2P50993 1020 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 ERVK-9P63128 1117 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 PDCLQ13371 301 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 EPHA7Q15375 998 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 DCAF17Q5H9S7 520 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 KLHL7Q8IXQ5 586 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
C9orf3-214ENST00000473778 SLC35C1Q96A29 364 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 RGL1Q9NZL6 768 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 VAV3Q9UKW4 847 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 NENFQ9UMX5 172 aa11.99□□□□□ -0.49
C9orf3-214ENST00000473778 KCNK3O14649 394 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 MSH4O15457 936 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 GDF11O95390 407 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 ALS2CLQ60I27 953 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 PACS2Q86VP3 889 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 DDX42Q86XP3 938 aaKnown RBP eCLIP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 IFT20Q8IY31 132 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 BCAS4Q8TDM0 211 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 MKL1Q969V6 931 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 NEUROG2Q9H2A3 272 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 BHMT2Q9H2M3 363 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 DBNDD1Q9H9R9 158 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 RNF14Q9UBS8 474 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 ARMCX3Q9UH62 379 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 SUGT1Q9Y2Z0 365 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 RBBP6Q7Z6E9 1792 aaKnown RBP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 ZMYM2Q9UBW7 1377 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 TGFB1I1O43294 461 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 HSF2BPO75031 334 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 HLA-DOAP06340 250 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 EPS15P42566 896 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 CRKP46108 304 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms