RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SAMD11Q96NU1 681 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 YME1L1Q96TA2 773 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 RNF26Q9BY78 433 aaPredicted RBP17.4■□□□□ 0.38
VTI1A-203ENST00000472892 CDY2AQ9Y6F7 541 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 IPO5O00410 1097 aaKnown RBP17.39■□□□□ 0.37
VTI1A-203ENST00000472892 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
VTI1A-203ENST00000472892 EPC2Q52LR7 807 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 TSHZ1Q6ZSZ6 1077 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 NME8Q8N427 588 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 FBXO22Q8NEZ5 403 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 TRAPPC12Q8WVT3 735 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 HLA-CQ95604 372 aa17.39■□□□□ 0.37
VTI1A-203ENST00000472892 FAM49AQ9H0Q0 323 aaPredicted RBP17.39■□□□□ 0.37
VTI1A-203ENST00000472892 AGO3Q9H9G7 860 aaKnown RBP17.39■□□□□ 0.37
VTI1A-203ENST00000472892 SMIM35A0A1B0GVV1 85 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 DDX39AO00148 427 aaKnown RBP17.38■□□□□ 0.37
VTI1A-203ENST00000472892 CIITAP33076 1130 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 KCNQ1P51787 676 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 CCT2P78371 535 aaKnown RBP17.38■□□□□ 0.37
VTI1A-203ENST00000472892 TOB2Q14106 344 aaPredicted RBP17.38■□□□□ 0.37
VTI1A-203ENST00000472892 MIS18BP1Q6P0N0 1132 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 MTHFD1LQ6UB35 978 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 BICD2Q8TD16 824 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 IL17RAQ96F46 866 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
VTI1A-203ENST00000472892 SLC26A6Q9BXS9 759 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 TBC1D22BQ9NU19 505 aa17.38■□□□□ 0.37
VTI1A-203ENST00000472892 COL4A6Q14031 1691 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 H3BNC9 293 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 BACH1O14867 736 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 HBP1O60381 514 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 PPFIA3O75145 1194 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 KLRC1P26715 233 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
VTI1A-203ENST00000472892 FAM160B1Q5W0V3 765 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 SWSAP1Q6NVH7 229 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 CCDC60Q8IWA6 550 aaPredicted RBP17.37■□□□□ 0.37
VTI1A-203ENST00000472892 TMEM192Q8IY95 271 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 ATP8B4Q8TF62 1192 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 ZNF577Q9BSK1 485 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 CELF4Q9BZC1 486 aaKnown RBP17.37■□□□□ 0.37
VTI1A-203ENST00000472892 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 NCOA5Q9HCD5 579 aaKnown RBP17.37■□□□□ 0.37
VTI1A-203ENST00000472892 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 TRPV2Q9Y5S1 764 aa17.37■□□□□ 0.37
VTI1A-203ENST00000472892 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-203ENST00000472892 SIP14410 1827 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 M0QZ92 97 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 EDIL3O43854 480 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 ATP4AP20648 1035 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 CD52P31358 61 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 ZNF484Q5JVG2 852 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 ZNF746Q6NUN9 644 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-203ENST00000472892 RTN4RL1Q86UN2 441 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-203ENST00000472892 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 RASGRP4Q8TDF6 673 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 ZNF274Q96GC6 653 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-203ENST00000472892 UIMC1Q96RL1 719 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 FTHL17Q9BXU8 183 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 RC3H2Q9HBD1 1191 aaKnown RBP17.36■□□□□ 0.37
VTI1A-203ENST00000472892 MAFBQ9Y5Q3 323 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-203ENST00000472892 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
VTI1A-203ENST00000472892 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.35■□□□□ 0.37
VTI1A-203ENST00000472892 USP11P51784 963 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 TMEM62Q0P6H9 643 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 PTPROQ16827 1216 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 PRR16Q569H4 304 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 PDXDC2PQ6P474 469 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 SMAP1Q8IYB5 467 aaPredicted RBP17.35■□□□□ 0.37
VTI1A-203ENST00000472892 KIAA0319LQ8IZA0 1049 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 FIBCD1Q8N539 461 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 LENG9Q96B70 501 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 ZNF689Q96CS4 500 aaPredicted RBP17.35■□□□□ 0.37
VTI1A-203ENST00000472892 MRPL38Q96DV4 380 aaKnown RBP17.35■□□□□ 0.37
VTI1A-203ENST00000472892 VPS54Q9P1Q0 977 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 PADI3Q9ULW8 664 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 IGSF9BQ9UPX0 1349 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 COL1A2P08123 1366 aa17.35■□□□□ 0.37
VTI1A-203ENST00000472892 ZBTB42B2RXF5 422 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 DGKIO75912 1065 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 LINC00271P0C7V0 271 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 KRT76Q01546 638 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 GPM6BQ13491 265 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
VTI1A-203ENST00000472892 LINC01599Q8WXQ3 324 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
VTI1A-203ENST00000472892 NECAB3Q96P71 396 aaPredicted RBP17.34■□□□□ 0.37
VTI1A-203ENST00000472892 PCDHA10Q9Y5I2 948 aa17.34■□□□□ 0.37
VTI1A-203ENST00000472892 C5orf67F2Z3F1 127 aa17.33■□□□□ 0.36
VTI1A-203ENST00000472892 RB1P06400 928 aa17.33■□□□□ 0.36
VTI1A-203ENST00000472892 PSAPP07602 524 aa17.33■□□□□ 0.36
VTI1A-203ENST00000472892 BMPR1AP36894 532 aa17.33■□□□□ 0.36
VTI1A-203ENST00000472892 SSRP1Q08945 709 aaKnown RBP17.33■□□□□ 0.36
VTI1A-203ENST00000472892 PAK2Q13177 524 aa17.33■□□□□ 0.36
VTI1A-203ENST00000472892 TRIM22Q8IYM9 498 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms