RNA–Protein interactions for RNA: ENST00000472431.1

NSMCE4A-207, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 819 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-207ENST00000472431 ITGB3BPQ13352 177 aaPredicted RBP16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 SMAD4Q13485 552 aaKnown RBP16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 TMEM266Q2M3C6 531 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 HEATR3Q7Z4Q2 680 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 CMTR2Q8IYT2 770 aaKnown RBP16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 KLHL23Q8NBE8 558 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 P2RX5Q93086 422 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 TMEM87BQ96K49 555 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 FBXL18Q96ME1 805 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 MXRA8Q9BRK3 442 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 CD207Q9UJ71 328 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 TRPC6Q9Y210 931 aa16.52■□□□□ 0.24
NSMCE4A-207ENST00000472431 IGSF9BQ9UPX0 1349 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 ACTR2P61160 394 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 IER5Q5VY09 327 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 RNF135Q8IUD6 432 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 NPAS4Q8IUM7 802 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 CELF4Q9BZC1 486 aaKnown RBP16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 CLEC1BQ9P126 229 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 PCDHA2Q9Y5H9 948 aa16.51■□□□□ 0.23
NSMCE4A-207ENST00000472431 STXBP3O00186 592 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 MAFGO15525 162 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 MGEA5O60502 916 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 CALM1P0DP23 149 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 CALM2P0DP24 149 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 CALM3P0DP25 149 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 SCG2P13521 617 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 NDUFV1P49821 464 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 NHLH1Q02575 133 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 PAK2Q13177 524 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 MICU3Q86XE3 530 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 FTHL17Q9BXU8 183 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
NSMCE4A-207ENST00000472431 MYH9P35579 1960 aaKnown RBP16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 NFASCO94856 1347 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 WDR81Q562E7 1941 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 GLP2RO95838 553 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 CCNE2O96020 404 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 NRIP1P48552 1158 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 STAT5BP51692 787 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 MTHFD1LQ6UB35 978 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 PLPPR4Q7Z2D5 763 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 RBM23Q86U06 439 aaKnown RBP16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 POF1BQ8WVV4 589 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 AGO4Q9HCK5 861 aaKnown RBP16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 TMEM260Q9NX78 707 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 HCSTQ9UBK5 93 aa16.49■□□□□ 0.23
NSMCE4A-207ENST00000472431 KDM3AQ9Y4C1 1321 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 SMIM35A0A1B0GVV1 85 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 M0QZ92 97 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 PPFIA3O75145 1194 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 EYA4O95677 639 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 MRE11P49959 708 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 RBM10P98175 930 aaKnown RBP16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 KRT76Q01546 638 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 FUT2Q10981 343 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 NAALADL2Q58DX5 795 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 SGMS1Q86VZ5 419 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 EFHBQ8N7U6 833 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 TMEM40Q8WWA1 233 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 ESYT1Q9BSJ8 1104 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 ANO3Q9BYT9 981 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 ERVK-5Q9HDB9 667 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 BARX2Q9UMQ3 279 aaPredicted RBP16.48■□□□□ 0.23
NSMCE4A-207ENST00000472431 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 ATG7O95352 703 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 RPLP2P05387 115 aaKnown RBP16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 STAG3L1P0CL83 205 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 KLRC1P26715 233 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 NAPAP54920 295 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 KIAA0319LQ8IZA0 1049 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 TCEANC2Q96MN5 208 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 GINS2Q9Y248 185 aa16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 NOC2LQ9Y3T9 749 aaKnown RBP16.47■□□□□ 0.23
NSMCE4A-207ENST00000472431 CACNA1HO95180 2353 aa16.46■□□□□ 0.23
NSMCE4A-207ENST00000472431 USP34Q70CQ2 3546 aa16.46■□□□□ 0.23
NSMCE4A-207ENST00000472431 MEIS1O00470 390 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms