RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 LAMA2P24043 3122 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 IGLV3-22A0A075B6J6 115 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 CYP3A7-CYP3A51PA0A087WV96 503 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 SMIM35A0A1B0GVV1 85 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 CCNT1O60563 726 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 CYP3A7P24462 503 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 KLRC1P26715 233 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 HOXC8P31273 242 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 PBX2P40425 430 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 RABGGTBP53611 331 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 MRPS6P82932 125 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 HMGN5P82970 282 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 ITGB3BPQ13352 177 aaPredicted RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 GRIN2CQ14957 1233 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 INF2Q27J81 1249 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 TRIM71Q2Q1W2 868 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 PLEKHG4Q58EX7 1191 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 FAM26DQ5JW98 314 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 MTHFD1LQ6UB35 978 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 TRMT1LQ7Z2T5 733 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 MYOCDQ8IZQ8 938 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 MYLIPQ8WY64 445 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 GTF3C6Q969F1 213 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 IL17RAQ96F46 866 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 CTAGE1Q96RT6 745 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 JPH2Q9BR39 696 aaPredicted RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 LLPHQ9BRT6 129 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 PHF20Q9BVI0 1012 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 TTYH1Q9H313 450 aaPredicted RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 GABBR1Q9UBS5 961 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 KCNJ14Q9UNX9 436 aa9.44□□□□□ -0.9
TSPAN1-205ENST00000472170 IGKV6D-21A0A0A0MT36 114 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 MBLAC1A4D2B0 266 aaPredicted RBP9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 TBX3O15119 743 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 GPR182O15218 404 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 MSH4O15457 936 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 DHX15O43143 795 aaKnown RBP9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 CHMP2AO43633 222 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 STAG3L1P0CL83 205 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 WDR5P61964 334 aaKnown RBP9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 ADAM17P78536 824 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 ME3Q16798 604 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 PPP4R3AQ6IN85 833 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 OTUD6AQ7L8S5 288 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 NECAB1Q8N987 351 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 CRYGNQ8WXF5 182 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 SLC5A5Q92911 643 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 SCLT1Q96NL6 688 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 GUCD1Q96NT3 240 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 UIMC1Q96RL1 719 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 YME1L1Q96TA2 773 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 CELF4Q9BZC1 486 aaKnown RBP9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 MAFBQ9Y5Q3 323 aaPredicted RBP9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 TRPV2Q9Y5S1 764 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 CDY2AQ9Y6F7 541 aa9.43□□□□□ -0.9
TSPAN1-205ENST00000472170 UPP2O95045 317 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 GJB5O95377 273 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 CCNE2O96020 404 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 CHRNA1P02708 482 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 CA3P07451 260 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 MCM2P49736 904 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 NFX1Q12986 1120 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 PAK2Q13177 524 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 RABEP1Q15276 862 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 XKR3Q5GH77 459 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 TSHZ1Q6ZSZ6 1077 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 TET1Q8NFU7 2136 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 PPM1EQ8WY54 764 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 ARNTL2Q8WYA1 636 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 CCDC43Q96MW1 224 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 SAMD11Q96NU1 681 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 TGS1Q96RS0 853 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 PCYT2Q99447 389 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 PRDM12Q9H4Q4 367 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 SUGCTQ9HAC7 445 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 RWDD3Q9Y3V2 267 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
TSPAN1-205ENST00000472170 DENND3A2RUS2 1198 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 RPS6KA5O75582 802 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 SEC24BO95487 1268 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 OATP04181 439 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 GHRP10912 638 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 MYOGP15173 224 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 PSMC5P62195 406 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 HIC1Q14526 733 aa9.41□□□□□ -0.9
TSPAN1-205ENST00000472170 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms