RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ASB16Q96NS5 453 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 NSUN5Q96P11 429 aaKnown RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 PIGSQ96S52 555 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CHRDQ9H2X0 955 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 VCPKMTQ9H867 229 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 JMJD4Q9H9V9 463 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 RRAGCQ9HB90 399 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 SALL4Q9UJQ4 1053 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 STARD13Q9Y3M8 1113 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 GREB1LQ9C091 1923 aaPredicted RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 A0A1W2PRG0 241 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 TMEM232C9JQI7 657 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 EREGO14944 169 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 CTAGE5O15320 804 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 GHRHP01286 108 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 HOXD8P13378 290 aaPredicted RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 VEGFAP15692 232 aaPredicted RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 ADCY7P51828 1080 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 MRPL12P52815 198 aaKnown RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 USP14P54578 494 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 DSC3Q14574 896 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 TTC38Q5R3I4 469 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 NBPF12Q5TAG4 269 aaPredicted RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 SYDE2Q5VT97 1194 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 PSAPL1Q6NUJ1 521 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 LRSAM1Q6UWE0 723 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 PIK3AP1Q6ZUJ8 805 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 USP50Q70EL3 339 aaPredicted RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 NCAPG2Q86XI2 1143 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 HOMER1Q86YM7 354 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 MICALL1Q8N3F8 863 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 ALKBH8Q96BT7 664 aaKnown RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 DCPSQ96C86 337 aaKnown RBP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 FTOQ9C0B1 505 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 AS3MTQ9HBK9 375 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 PCDHA6Q9UN73 950 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
SMNDC1-204ENST00000471297 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FAM237AA0A1B0GTK4 181 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FSD2A1L4K1 749 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FAM181BA6NEQ2 426 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 GLTPD2A6NH11 291 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 WDR46O15213 610 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 RGS9O75916 674 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 KIF4AO95239 1232 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 LIG1P18858 919 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 SLC16A2P36021 539 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ECE1P42892 770 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 MRE11P49959 708 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 STAT2P52630 851 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FAM160A1Q05DH4 1040 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 IKQ13123 557 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ORC1Q13415 861 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ORC2Q13416 577 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 NONOQ15233 471 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 CDC37Q16543 378 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 NOL9Q5SY16 702 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ARL6IP4Q66PJ3 421 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 KANK3Q6NY19 840 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ELMSAN1Q6PJG2 1045 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 C20orf204Q6ZNR8 217 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 RASGRP2Q7LDG7 609 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FBXO11Q86XK2 927 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ELOA2Q8IYF1 753 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 SCYL3Q8IZE3 742 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FSIP1Q8NA03 581 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ENGASEQ8NFI3 743 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ACER1Q8TDN7 264 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 LPAR1Q92633 364 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FERMT2Q96AC1 680 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 TIGD1Q96MW7 591 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 WDR18Q9BV38 432 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 AMNQ9BXJ7 453 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 KIAA1683Q9H0B3 1180 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 RBSNQ9H1K0 784 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 NUP62CLQ9H1M0 184 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 TNMDQ9H2S6 317 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 CPVLQ9H3G5 476 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 CLSTN2Q9H4D0 955 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 RIC8AQ9NPQ8 531 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 PICK1Q9NRD5 415 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 DACT1Q9NYF0 836 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 GGA3Q9NZ52 723 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 FEM1BQ9UK73 627 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 PNMA2Q9UL42 364 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 PCDHB6Q9Y5E3 794 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 SRPRBQ9Y5M8 271 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 ASTN2O75129 1339 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 MYH8P13535 1937 aa6.91□□□□□ -1.3
SMNDC1-204ENST00000471297 TCHHQ07283 1943 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 SYCE3A1L190 88 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 C19orf81C9J6K1 198 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms