RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FBXW5Q969U6 566 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 NUDT11Q96G61 164 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 DNAJC2Q99543 621 aaKnown RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 DNAJC7Q99615 494 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 DHRS4Q9BTZ2 278 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 TRIM8Q9BZR9 551 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PDGFDQ9GZP0 370 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 KCND1Q9NSA2 647 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 CATSPERZQ9NTU4 200 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 ARHGAP20Q9P2F6 1191 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 SFMBT1Q9UHJ3 866 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 ZFR2Q9UPR6 939 aaKnown RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PCDHA9Q9Y5H5 950 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 ZNF536O15090 1300 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 CCDC66A2RUB6 948 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 PRAMEF25A6NGN4 478 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 FAM90A27PA6NNH2 459 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ZNF561-AS1K7EIQ3 104 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 KCNK3O14649 394 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 RASGRP1O95267 797 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 IL18BPO95998 194 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 KNG1P01042 644 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 AMY2AP04746 511 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 CHGBP05060 677 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 CKMP06732 381 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ENO2P09104 434 aaPredicted RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 SRGAP2CP0DJJ0 459 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 KRT15P19012 456 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 AMY2BP19961 511 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 MC4RP32245 332 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 GJA4P35212 333 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 DNM2P50570 870 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 JAM2P57087 298 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ABHD18Q0P651 414 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 DBPQ10586 325 aaPredicted RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 NFATC3Q12968 1075 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 CCDC142Q17RM4 750 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 C2orf27AQ580R0 203 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 TRIM61Q5EBN2 209 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ZC3H12BQ5HYM0 836 aaKnown RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 BTBD8Q5XKL5 378 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 FSTL4Q6MZW2 842 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ARHGAP36Q6ZRI8 547 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 GPR155Q7Z3F1 870 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 BRAPQ7Z569 592 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 RALYLQ86SE5 291 aaKnown RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 NOSTRINQ8IVI9 506 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ZC3H7AQ8IWR0 971 aaKnown RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 KBTBD2Q8IY47 623 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 NLGN4XQ8N0W4 816 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 JMYQ8N9B5 988 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 GSTCDQ8NEC7 633 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ZSWIM2Q8NEG5 633 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 THAP3Q8WTV1 239 aaPredicted RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 MKL1Q969V6 931 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 TACO1Q9BSH4 297 aaKnown RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 OSBPL2Q9H1P3 480 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 MEGF9Q9H1U4 602 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 BARX1Q9HBU1 254 aaPredicted RBP2.23□□□□□ -2.05
UBXN4-207ENST00000471246 SMURF1Q9HCE7 757 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 SLC39A2Q9NP94 309 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 RIC8BQ9NVN3 520 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ADAM29Q9UKF5 820 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 COQ6Q9Y2Z9 468 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 PTCH2Q9Y6C5 1203 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 ATP23Q9Y6H3 246 aa2.23□□□□□ -2.05
UBXN4-207ENST00000471246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 H0Y858 1186 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 GSTA4O15217 222 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 EFCAB14O75071 495 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 CNOT4O95628 575 aaKnown RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 C4BPAP04003 597 aaKnown RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 AOAHP28039 575 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 CSF2RBP32927 897 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 EPHB4P54760 987 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 INHBCP55103 352 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 FOXE3Q13461 319 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 BMS1Q14692 1282 aaKnown RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 SURF1Q15526 300 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 CRY1Q16526 586 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 TM4SF20Q53R12 229 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 SOGA3Q5TF21 947 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 ARHGEF18Q6ZSZ5 1173 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 EP400NLQ6ZTU2 488 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 Q6ZUG5 572 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 C16orf59Q7L2K0 433 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 FGD2Q7Z6J4 655 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 OSTM1Q86WC4 334 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 REXO1L1PQ8IX06 675 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 DNERQ8NFT8 737 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 SLC7A14Q8TBB6 771 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 SCLYQ96I15 445 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 WWC2-AS2Q96NR7 200 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 MRPL4Q9BYD3 311 aaKnown RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 CELF4Q9BZC1 486 aaKnown RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 NCOA5Q9HCD5 579 aaKnown RBP2.22□□□□□ -2.05
UBXN4-207ENST00000471246 PPP4R1LQ9P1A2 415 aa2.22□□□□□ -2.05
UBXN4-207ENST00000471246 ARHGAP28Q9P2N2 729 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms