RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 OXSMQ9NWU1 459 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 BTG4Q9NY30 223 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-204ENST00000471245 TMEM59LQ9UK28 342 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 TRHDEQ9UKU6 1024 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
CKS1B-204ENST00000471245 SPATA31A6Q5VVP1 1343 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 SLC12A8A0AV02 714 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 C22orf46C9J442 243 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 USP2O75604 605 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-204ENST00000471245 DGKIO75912 1065 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 PRKD3O94806 890 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 SESN3P58005 492 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 RTP1P59025 263 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 PLCL1Q15111 1095 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 RGL3Q3MIN7 710 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 HSF5Q4G112 596 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-204ENST00000471245 MEX3CQ5U5Q3 659 aaKnown RBP7.47□□□□□ -1.21
CKS1B-204ENST00000471245 KRTAP19-1Q8IUB9 90 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 TEX2Q8IWB9 1127 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 PLEKHO2Q8TD55 490 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 ASIC4Q96FT7 647 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 SLAMF8Q9P0V8 285 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 FAN1Q9Y2M0 1017 aa7.47□□□□□ -1.21
CKS1B-204ENST00000471245 E2F8A0AVK6 867 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 H7C1D1 291 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 GABRDO14764 452 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
CKS1B-204ENST00000471245 AMY2AP04746 511 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 TSPY4P0CV99 314 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 TSPY10P0CW01 314 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 AMY2BP19961 511 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 CD96P40200 585 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 FIGNQ5HY92 759 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 GALNT18Q6P9A2 607 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 RAVER1Q8IY67 606 aaKnown RBP7.46□□□□□ -1.22
CKS1B-204ENST00000471245 ABI1Q8IZP0 508 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 LZTR1Q8N653 840 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 RELTQ969Z4 430 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 CHMP4CQ96CF2 233 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 RWDD3Q9Y3V2 267 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 TAF6LQ9Y6J9 622 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 CROCC2H7BZ55 1655 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 DUOX2Q9NRD8 1548 aa7.46□□□□□ -1.22
CKS1B-204ENST00000471245 GCC2Q8IWJ2 1684 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 NRDCO43847 1150 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 FBXO21O94952 628 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 FUCA1P04066 466 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 ZBTB48P10074 688 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 JAM2P57087 298 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 IRF9Q00978 393 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 RALGPS1Q5JS13 557 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 ARHGAP36Q6ZRI8 547 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 CEP128Q6ZU80 1094 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 OSTM1Q86WC4 334 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 NOSTRINQ8IVI9 506 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 PDZD8Q8NEN9 1154 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 SLC5A5Q92911 643 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 SMAD5Q99717 465 aaKnown RBP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 PCGF6Q9BYE7 350 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 ADAMTS10Q9H324 1103 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 SLC6A20Q9NP91 592 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 PDLIM7Q9NR12 457 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
CKS1B-204ENST00000471245 IMPACTQ9P2X3 320 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 SRPK3Q9UPE1 567 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 SPO11Q9Y5K1 396 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 ADGRB3O60242 1522 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 NHSL1Q5SYE7 1610 aa7.45□□□□□ -1.22
CKS1B-204ENST00000471245 RGS12O14924 1447 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 TCRBV5S4A2TA0A5A2 114 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 FITM1A5D6W6 292 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 KRIT1O00522 736 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 KRT15P19012 456 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 SLC6A11P48066 632 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 ERVK-21P61565 698 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 PHC1P78364 1004 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-204ENST00000471245 PPP2R5AQ15172 486 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 CHRNA2Q15822 529 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 DDB1Q16531 1140 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 ZNF792Q3KQV3 632 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 EMC4Q5J8M3 183 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 GPR158Q5T848 1215 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 HDGFL2Q7Z4V5 671 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-204ENST00000471245 SPPL2CQ8IUH8 684 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 PASD1Q8IV76 773 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 NLGN4XQ8N0W4 816 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 PIP4K2CQ8TBX8 421 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 C8orf48Q96LL4 319 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 CAMKK2Q96RR4 588 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 GEMIN8Q9NWZ8 242 aaKnown RBP7.44□□□□□ -1.22
CKS1B-204ENST00000471245 H2AFY2Q9P0M6 372 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms