RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 CYLC1P35663 651 aaPredicted RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 RNF207Q6ZRF8 634 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 MIER3Q7Z3K6 550 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 TRIM59Q8IWR1 403 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 ACRBPQ8NEB7 543 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 MAF1Q9H063 256 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 MMRN2Q9H8L6 949 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 LZTFL1Q9NQ48 299 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 TBC1D22BQ9NU19 505 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 RLFQ13129 1914 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 RSPH10B2B2RC85 870 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 CXCL11O14625 94 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 EIF3DO15371 548 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 DHX15O43143 795 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 P4HBP07237 508 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 RSPH10BP0C881 870 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 CASP5P51878 434 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 KRT83P78385 493 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 NCBP1Q09161 790 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 PPIL2Q13356 520 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 ARHGAP29Q52LW3 1261 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 GADL1Q6ZQY3 521 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 ZNF662Q6ZS27 426 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 FRMD5Q7Z6J6 570 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 HOMER2Q9NSB8 354 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 TYW1Q9NV66 732 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 MYO1AQ9UBC5 1043 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 ODF2LQ9ULJ1 636 aa18.68■□□□□ 0.58
SMARCD3-206ENST00000470588 PRPF6O94906 941 aaKnown RBP18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 MYBP10242 640 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 RPL13P26373 211 aaKnown RBP18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 PPP2R3AQ06190 1150 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 TUBB2AQ13885 445 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 PGM5Q15124 567 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 REPS2Q8NFH8 660 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 NEK11Q8NG66 645 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 TUBB2BQ9BVA1 445 aa18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMARCD3-206ENST00000470588 UNCXA6NJT0 531 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 FANCGO15287 622 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 GUCY2CP25092 1073 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 HOXD13P35453 343 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 MTMR1Q13613 665 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 SNRNP48Q6IEG0 339 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 MYCT1Q8N699 235 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 RMDN3Q96TC7 470 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 PDCD2LQ9BRP1 358 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 PDCL3Q9H2J4 239 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 PARVGQ9HBI0 331 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 PXMP2Q9NR77 195 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 RNF146Q9NTX7 359 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 PLAGL2Q9UPG8 496 aa18.66■□□□□ 0.58
SMARCD3-206ENST00000470588 A0A0G2JLL6 359 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ARHGEF35A5YM69 484 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 EIF3CLB5ME19 914 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ATP2A1O14983 1001 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 GCNT3O95395 438 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 NR2F2P24468 414 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ARHGAP25P42331 645 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ZNF131P52739 623 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 KCNMA1Q12791 1236 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 NFIL3Q16649 462 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ARHGEF16Q5VV41 709 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 STXBP4Q6ZWJ1 553 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 PRRT2Q7Z6L0 340 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 CLMNQ96JQ2 1002 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 EIF3CQ99613 913 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 LXNQ9BS40 222 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 TEX13BQ9BXU2 312 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 NHEJ1Q9H9Q4 299 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 UBE4BO95155 1302 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ZBTB39O15060 712 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 LYPLA2O95372 231 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 ZNF569Q5MCW4 686 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 CNKSR2Q8WXI2 1034 aa18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 NUCKS1Q9H1E3 243 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 METTL14Q9HCE5 456 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 FAM207AQ9NSI2 230 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 DBR1Q9UK59 544 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 REXO2Q9Y3B8 237 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-206ENST00000470588 A0A0U1RQJ8 604 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 SPDYE16A6NNV3 312 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 SFI1A8K8P3 1242 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 IRF6O14896 467 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 MYCLP12524 364 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 ITGB3BPQ13352 177 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 BAATQ14032 418 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 HSP90AA2PQ14568 343 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 NSMFQ6X4W1 530 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 MOB2Q70IA6 237 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 BANK1Q8NDB2 785 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms