RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ZNF295-AS1Q8N0V1 137 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 LINC00301Q8NCQ3 95 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 FERMT2Q96AC1 680 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 USP28Q96RU2 1077 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 TEX13BQ9BXU2 312 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 ZCCHC17Q9NP64 241 aaKnown RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 FBXO28Q9NVF7 368 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 SRRDQ9UH36 339 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 DDX49Q9Y6V7 483 aaKnown RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 ADGRA2Q96PE1 1338 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 A0A1W2PQ27 194 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 A0A1W2PQ64 194 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 A0A1W2PQD8 194 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 CCL5P13501 91 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 USP11P51784 963 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 GHRHRQ02643 423 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 DPYDQ12882 1025 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 ARL6IP4Q66PJ3 421 aaKnown RBP7.51□□□□□ -1.21
VAMP3-202ENST00000470357 ADALQ6DHV7 355 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 MOXD1Q6UVY6 613 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 SLC9A9Q8IVB4 645 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-202ENST00000470357 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 FBXO40Q9UH90 709 aa7.51□□□□□ -1.21
VAMP3-202ENST00000470357 CUTAO60888 179 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 LGR5O75473 907 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 SLC25A27O95847 323 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ALAS1P13196 640 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 GRK4P32298 578 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 STAT3P40763 770 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 PRPHP41219 470 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 PSMC4P43686 418 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 GCLCP48506 637 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 TOB1P50616 345 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 HSD17B4P51659 736 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 SEC13P55735 322 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ATP2C1P98194 919 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 FOXK2Q01167 660 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 KRT76Q01546 638 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CEBPZQ03701 1054 aaKnown RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 MOGSQ13724 837 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 PTPAQ15257 358 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 INF2Q27J81 1249 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 RNFT1Q5M7Z0 435 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 JAKMIP3Q5VZ66 844 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 PPP4R3AQ6IN85 833 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CCDC73Q6ZRK6 1079 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ANKRD23Q86SG2 305 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ANKMY2Q8IV38 441 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CPXCR1Q8N123 301 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CHST13Q8NET6 341 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 TBCKQ8TEA7 893 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 U2AF1L4Q8WU68 220 aaKnown RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 GTPBP3Q969Y2 492 aaKnown RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ATG4CQ96DT6 458 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CCDC34Q96HJ3 373 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ARID3AQ99856 593 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 PYM1Q9BRP8 204 aaKnown RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 RAB34Q9BZG1 259 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 NUCKS1Q9H1E3 243 aaKnown RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 BIN2Q9UBW5 565 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 CLIC4Q9Y696 253 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ZNFX1Q9P2E3 1918 aaKnown RBP7.5□□□□□ -1.21
VAMP3-202ENST00000470357 PFASO15067 1338 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 ZNF536O15090 1300 aa7.5□□□□□ -1.21
VAMP3-202ENST00000470357 MUC3AQ02505 3323 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 B4DLN1 442 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 MEIS2O14770 477 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 NEMFO60524 1076 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 LETM1O95202 739 aaPredicted RBP7.49□□□□□ -1.21
VAMP3-202ENST00000470357 SGPL1O95470 568 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 CFBP00751 764 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 CYP3A4P08684 503 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 CMA1P23946 247 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 MCM7P33993 719 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 SREBF1P36956 1147 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 SNAP25P60880 206 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 HERVK_113P62684 666 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 CCNA1P78396 465 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 KIF22Q14807 665 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 UBE2SQ16763 222 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 LETM2Q2VYF4 491 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 TREML2Q5T2D2 321 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 SNRNP48Q6IEG0 339 aaKnown RBP7.49□□□□□ -1.21
VAMP3-202ENST00000470357 XRRA1Q6P2D8 792 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 RIOX2Q8IUF8 465 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 PGBD3Q8N328 593 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 REPS2Q8NFH8 660 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 RASGRP4Q8TDF6 673 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 MRPS27Q92552 414 aaKnown RBP7.49□□□□□ -1.21
VAMP3-202ENST00000470357 TRERF1Q96PN7 1200 aa7.49□□□□□ -1.21
VAMP3-202ENST00000470357 GDF15Q99988 308 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms