RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NARFQ9UHQ1 456 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 AKR1B1P15121 316 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 HOXA7P31268 230 aaPredicted RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.615e-35■■■■■ 127.1
SMC4-210ENST00000469762 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 PBKQ96KB5 322 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.612e-9■■■■■ 75.2
SMC4-210ENST00000469762 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 HDAC9Q9UKV0 1011 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 PCDHA12Q9UN75 941 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 AKAP3O75969 853 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 GNA14O95837 355 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 CTNNA1P35221 906 aaKnown RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 HERC4Q5GLZ8 1057 aaPredicted RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 ALKBH5Q6P6C2 394 aaKnown RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 TEX11Q8IYF3 940 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 HES6Q96HZ4 224 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 CNTNAP4Q9C0A0 1308 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 IGSF9BQ9UPX0 1349 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 KIAA0754O94854 1291 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.619e-17■■■■■ 55.5
SMC4-210ENST00000469762 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 NR2F2P24468 414 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 CASP4P49662 377 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 GSTO1P78417 241 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 GPBP1Q86WP2 473 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 MYCBPQ99417 103 aaPredicted RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 JPH2Q9BR39 696 aaPredicted RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 TRAF3IP3Q9Y228 551 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 F8VZ95 297 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 SLC16A2P36021 539 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 KCNA1Q09470 495 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 GIT2Q14161 759 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 RNF187Q5TA31 235 aaPredicted RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 SLC30A5Q8TAD4 765 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 LNX1Q8TBB1 728 aaPredicted RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 LRRC27Q9C0I9 530 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 CENPHQ9H3R5 247 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 OSGEPQ9NPF4 335 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 PGRMC1O00264 195 aaKnown RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 CRYGNQ8WXF5 182 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 TATDN2Q93075 761 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 TLCD1Q96CP7 247 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 BORCS6Q96GS4 357 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 SEC16BQ96JE7 1060 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 SYT11Q9BT88 431 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 NYXQ9GZU5 481 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 ADAM7Q9H2U9 754 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
SMC4-210ENST00000469762 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
SMC4-210ENST00000469762 PNMA6FA0A0J9YX94 578 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 RGL2O15211 777 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 ANKRD20A8PQ5CZ79 823 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 MDM1Q8TC05 714 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 ERVK-5Q9HDB9 667 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 ADAMTSL1Q8N6G6 1762 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 DDX3YO15523 660 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 SHBGP04278 402 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 SPATA31C1P0DKV0 1188 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 DRD4P21917 467 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 PPP2R2AP63151 447 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 C10orf76Q5T2E6 689 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 AGBL2Q5U5Z8 902 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 SLC35C1Q96A29 364 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 TRIM51Q9BSJ1 452 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 CDCA7Q9BWT1 371 aaPredicted RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 CD209Q9NNX6 404 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 ZDHHC18Q9NUE0 388 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 SUCLA2Q9P2R7 463 aaPredicted RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 ASTN1O14525 1302 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 GAKO14976 1311 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 KRIT1O00522 736 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 COPB2P35606 906 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms