RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TMCO5BA8MYB1 307 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 TISP43B9A030 160 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 RBAK-RBAKDNI3L0D1 243 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 PDE2AO00408 941 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 GAS7O60861 476 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 TBC1D8O95759 1140 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 MYCLP12524 364 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 USP11P51784 963 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 SLC12A3P55017 1021 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 KRT83P78385 493 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 SLC7A5Q01650 507 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 SPIRE1Q08AE8 756 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 SMC1AQ14683 1233 aaKnown RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 LONRF2Q1L5Z9 754 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 COG1Q8WTW3 980 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 POM121Q96HA1 1249 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 PACSIN1Q9BY11 444 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 HAUS4Q9H6D7 363 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 WRAP73Q9P2S5 460 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-203ENST00000469739 HDAC9Q9UKV0 1011 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 RABGAP1Q9Y3P9 1069 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 PCDHA13Q9Y5I0 950 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 SAR1BQ9Y6B6 198 aa10.37□□□□□ -0.75
TOP3A-203ENST00000469739 PEX10O60683 326 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 N4BP1O75113 896 aaKnown RBP10.36□□□□□ -0.75
TOP3A-203ENST00000469739 EIF2AK2P19525 551 aaKnown RBP10.36□□□□□ -0.75
TOP3A-203ENST00000469739 LMAN1P49257 510 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 RASA3Q14644 834 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 IL31RAQ8NI17 732 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-203ENST00000469739 WNT10BO00744 389 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 FTCDO95954 541 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 LRRC63Q05C16 580 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 ERMNQ8TAM6 284 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 RABGGTAQ92696 567 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 VTI1AQ96AJ9 217 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 MS4A14Q96JA4 679 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 ERGIC2Q96RQ1 377 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 NUP58Q9BVL2 599 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 PCIF1Q9H4Z3 704 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 CCPG1Q9ULG6 757 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 CEP350Q5VT06 3117 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 CETN3O15182 167 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 AKAP3O75969 853 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 FAM13AO94988 1023 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 NSMFQ6X4W1 530 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 NIM1KQ8IY84 436 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 CEP112Q8N8E3 955 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 ZNF577Q9BSK1 485 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 KDM3AQ9Y4C1 1321 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 PSME4Q14997 1843 aa10.36□□□□□ -0.75
TOP3A-203ENST00000469739 TLR2O60603 784 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 LRRN2O75325 713 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 ENTPD3O75355 529 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 HOXD13P35453 343 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 SREBF1P36956 1147 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 MAGEA9P43362 315 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 EXOC4Q96A65 974 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 HOOK2Q96ED9 719 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 GMCL1Q96IK5 515 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 FAM84AQ96KN4 292 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 SPAG5Q96R06 1193 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 PLAGL2Q9UPG8 496 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 FGFR1OPO95684 399 aaKnown RBP10.35□□□□□ -0.75
TOP3A-203ENST00000469739 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 RPA1P27694 616 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 ACTN2P35609 894 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 EHHADHQ08426 723 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 AP3B2Q13367 1082 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 HDAC7Q8WUI4 952 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 FAM151AQ8WW52 585 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 BAP1Q92560 729 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 SEPT11Q9NVA2 429 aaKnown RBP10.35□□□□□ -0.75
TOP3A-203ENST00000469739 COL20A1Q9P218 1284 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 ADAM21Q9UKJ8 722 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 MYO3BQ8WXR4 1341 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
TOP3A-203ENST00000469739 FLOT1O75955 427 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 NOL4O94818 638 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 SLITRK3O94933 977 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 HDLBPQ00341 1268 aaKnown RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 MEA1Q16626 185 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 GMCL1P1Q8NEA9 526 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 CCDC102AQ96A19 550 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 LRRC27Q9C0I9 530 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 PSD3Q9NYI0 1048 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 ARMCX3Q9UH62 379 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms