RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 GUCY2CP25092 1073 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 ASPRV1Q53RT3 343 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 ODF2Q5BJF6 829 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
VARS2-205ENST00000469358 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 CEP63Q96MT8 703 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 DHX36Q9H2U1 1008 aaKnown RBP13.21□□□□□ -0.29
VARS2-205ENST00000469358 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 FNTAP49354 379 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 NFIAQ12857 509 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 ZNF211Q13398 564 aaPredicted RBP13.21□□□□□ -0.3
VARS2-205ENST00000469358 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 AADACL2Q6P093 401 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 DAAM2Q86T65 1068 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 SYN2Q92777 582 aaPredicted RBP13.21□□□□□ -0.3
VARS2-205ENST00000469358 TMBIM4Q9HC24 238 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 TMEM59LQ9UK28 342 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 NOVA2Q9UNW9 492 aaKnown RBP13.21□□□□□ -0.3
VARS2-205ENST00000469358 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.3
VARS2-205ENST00000469358 H0YGN5 161 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 USP11P51784 963 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 TCP10Q12799 353 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 PEX26Q7Z412 305 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 TPCN2Q8NHX9 752 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 ISCUQ9H1K1 167 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 LUC7LQ9NQ29 371 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 RGL1Q9NZL6 768 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 NFS1Q9Y697 457 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 SMIM23A6NLE4 172 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.3
VARS2-205ENST00000469358 TTLL1O95922 423 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 GIT2Q14161 759 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 LLGL1Q15334 1064 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 RUBCNQ92622 972 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 THRAP3Q9Y2W1 955 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 GCOM1H8Y6P7 765 aaPredicted RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 ZBTB5O15062 677 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 MYZAPP0CAP1 466 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 SF3B2Q13435 895 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 COG2Q14746 738 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 GLYCTKQ8IVS8 523 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
VARS2-205ENST00000469358 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 IGSF9BQ9UPX0 1349 aa13.2□□□□□ -0.3
VARS2-205ENST00000469358 MYH7BA7E2Y1 1941 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 SHMT1P34896 483 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 GABPAQ06546 454 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 MREGQ8N565 214 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 CERS5Q8N5B7 392 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 RUSC1Q9BVN2 902 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 ANO3Q9BYT9 981 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 NUCKS1Q9H1E3 243 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 LRRN2O75325 713 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 B4GALNT4Q76KP1 1039 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 GLG1Q92896 1179 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 SIX2Q9NPC8 291 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 ATP8A1Q9Y2Q0 1164 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 PGRMC1O00264 195 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 GCNT3O95395 438 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 SPATA31C1P0DKV0 1188 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 ZBTB48P10074 688 aaPredicted RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 NOVP48745 357 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 MAGOHP61326 146 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 DHX9Q08211 1270 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
VARS2-205ENST00000469358 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 USP40Q9NVE5 1235 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms