RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 TRAPPC12Q8WVT3 735 aa16.85■□□□□ 0.29
SDCCAG3-209ENST00000468963 CCDC136Q96JN2 1154 aa16.85■□□□□ 0.29
SDCCAG3-209ENST00000468963 FAM49AQ9H0Q0 323 aaPredicted RBP16.85■□□□□ 0.29
SDCCAG3-209ENST00000468963 RC3H2Q9HBD1 1191 aaKnown RBP16.85■□□□□ 0.29
SDCCAG3-209ENST00000468963 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
SDCCAG3-209ENST00000468963 ATP4AP20648 1035 aa16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 GPM6BQ13491 265 aa16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 MCTP2Q6DN12 878 aa16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 MTHFD1LQ6UB35 978 aa16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 ZNF689Q96CS4 500 aaPredicted RBP16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 MRPL38Q96DV4 380 aaKnown RBP16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 C6orf50Q9HD87 102 aa16.84■□□□□ 0.29
SDCCAG3-209ENST00000468963 SMIM35A0A1B0GVV1 85 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 EDIL3O43854 480 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 HBP1O60381 514 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 KLRC1P26715 233 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 CD52P31358 61 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 COL4A6Q14031 1691 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 FIBCD1Q8N539 461 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 LINC01599Q8WXQ3 324 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 PHKBQ93100 1093 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 CELF4Q9BZC1 486 aaKnown RBP16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 UBE2ZQ9H832 354 aaPredicted RBP16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 KDM3AQ9Y4C1 1321 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 TRPV2Q9Y5S1 764 aa16.83■□□□□ 0.28
SDCCAG3-209ENST00000468963 C5orf67F2Z3F1 127 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 DDX39AO00148 427 aaKnown RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 IPO5O00410 1097 aaKnown RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 REC8O95072 547 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 RB1P06400 928 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 IFNAR1P17181 557 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 PSMA5P28066 241 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 GNA11P29992 359 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 CIITAP33076 1130 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 BMPR1AP36894 532 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 TMEM62Q0P6H9 643 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 PTPROQ16827 1216 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 SWSAP1Q6NVH7 229 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 REXO1Q8N1G1 1221 aaKnown RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 ATP8B4Q8TF62 1192 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 CCDC12Q8WUD4 166 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 CLP1Q92989 425 aaKnown RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 RNF26Q9BY78 433 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 TBC1D22BQ9NU19 505 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 PADI3Q9ULW8 664 aa16.82■□□□□ 0.28
SDCCAG3-209ENST00000468963 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZBTB42B2RXF5 422 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 BACH1O14867 736 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 DGKIO75912 1065 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 LEXMQ3ZCV2 418 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZNF484Q5JVG2 852 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 FAM160B1Q5W0V3 765 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 MIS18BP1Q6P0N0 1132 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 KIAA0319LQ8IZA0 1049 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 BANK1Q8NDB2 785 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZNF577Q9BSK1 485 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 FTHL17Q9BXU8 183 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZNF302Q9NR11 478 aa16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 MAFBQ9Y5Q3 323 aaPredicted RBP16.81■□□□□ 0.28
SDCCAG3-209ENST00000468963 M0QZ92 97 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 CCT2P78371 535 aaKnown RBP16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 KRT76Q01546 638 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 COL19A1Q14993 1142 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZNF746Q6NUN9 644 aaPredicted RBP16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 RUFY3Q7L099 469 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 RASGRP4Q8TDF6 673 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 LENG9Q96B70 501 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 SLC26A6Q9BXS9 759 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 CDHR5Q9HBB8 845 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 EVPLQ92817 2033 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
SDCCAG3-209ENST00000468963 COL1A2P08123 1366 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 ADGRA3Q8IWK6 1321 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 SETQ01105 290 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 BTG3Q14201 252 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 PRR16Q569H4 304 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 FAM43BQ6ZT52 329 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 BICD2Q8TD16 824 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 NEK9Q8TD19 979 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 NCOA5Q9HCD5 579 aaKnown RBP16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 PCDHA10Q9Y5I2 948 aa16.79■□□□□ 0.28
SDCCAG3-209ENST00000468963 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 GRM6O15303 877 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 KCNA5P22460 613 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 CTNNB1P35222 781 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 USP11P51784 963 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 PAK2Q13177 524 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 TIGD5Q53EQ6 642 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms