RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 H0Y858 1186 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 PRRG2O14669 202 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 B4GALT3O60512 393 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 B4GALT4O60513 344 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 KLHL18O94889 574 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 ASLP04424 464 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 PTGS1P23219 599 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 AOAHP28039 575 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 BUD31P41223 144 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-207ENST00000468723 IRF9Q00978 393 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 SKOR2Q2VWA4 1001 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-207ENST00000468723 TKFCQ3LXA3 575 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 PIK3R6Q5UE93 754 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 LRSAM1Q6UWE0 723 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 GPR155Q7Z3F1 870 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 HOMER1Q86YM7 354 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 KBTBD2Q8IY47 623 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 ERCC4Q92889 916 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-207ENST00000468723 MBD6Q96DN6 1003 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 BARX1Q9HBU1 254 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-207ENST00000468723 INCENPQ9NQS7 918 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 KCNH7Q9NS40 1196 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 BTBD7Q9P203 1132 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 CECR2Q9BXF3 1484 aa5.7□□□□□ -1.5
GPNMB-207ENST00000468723 EIF4G1Q04637 1599 aaKnown RBP5.69□□□□□ -1.5
GPNMB-207ENST00000468723 PRAMEF22A3QJZ6 481 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 RASSF10A6NK89 507 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 B4E1Z4 1266 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 HIP1RO75146 1068 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 NPTXRO95502 500 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 CELA3BP08861 270 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 JMJD7P0C870 316 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 TCEA2Q15560 299 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 ERICH6BQ5W0A0 696 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 JAZF1Q86VZ6 243 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 KLHL36Q8N4N3 616 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 HIPK4Q8NE63 616 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 APPBP2Q92624 585 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 DLG3Q92796 817 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 WNK4Q96J92 1243 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 GBP4Q96PP9 640 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 AMNQ9BXJ7 453 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 GALNT8Q9NY28 637 aa5.69□□□□□ -1.5
GPNMB-207ENST00000468723 ANKRD62A6NC57 917 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 TRAF5O00463 557 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 FOXP2O15409 715 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 ZBTB48P10074 688 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-207ENST00000468723 ADCY8P40145 1251 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 MECP2P51608 486 aaKnown RBP5.68□□□□□ -1.5
GPNMB-207ENST00000468723 HERVK_113P62684 666 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 WDR72Q3MJ13 1102 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 CFAP100Q494V2 611 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 TBC1D10BQ4KMP7 808 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-207ENST00000468723 CDCA2Q69YH5 1023 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-207ENST00000468723 DPP8Q6V1X1 898 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-207ENST00000468723 Q6ZUG5 572 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 UBE2R2Q712K3 238 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-207ENST00000468723 ASB15Q8WXK1 588 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 BOCQ9BWV1 1114 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 JADE2Q9NQC1 790 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 PTPN22Q9Y2R2 807 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 B3GALT1Q9Y5Z6 326 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 NCANO14594 1321 aa5.68□□□□□ -1.5
GPNMB-207ENST00000468723 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 RFPL3O75679 317 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 MPIG6BO95866 241 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 CHGBP05060 677 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 FLT3P36888 993 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 KIF11P52732 1056 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 IL13RA1P78552 427 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 CATSPEREQ5SY80 951 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 C16orf86Q6ZW13 317 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 LIMS2Q7Z4I7 341 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 CHST14Q8NCH0 376 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 WDR48Q8TAF3 677 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 PTPN18Q99952 460 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 CABP5Q9NP86 173 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 ADAM29Q9UKF5 820 aa5.67□□□□□ -1.5
GPNMB-207ENST00000468723 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
GPNMB-207ENST00000468723 TLDC2A0PJX2 215 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 K7ESM1 405 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 LAMTOR5O43504 91 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 CDC45O75419 566 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 PLATP00750 562 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 ZNF888P0CJ79 500 aaPredicted RBP5.66□□□□□ -1.5
GPNMB-207ENST00000468723 NCLP19338 710 aaKnown RBP5.66□□□□□ -1.5
GPNMB-207ENST00000468723 CSF2RBP32927 897 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 ECE1P42892 770 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 NEK4P51957 841 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 RRADP55042 308 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 ARHGAP44Q17R89 818 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 ZNF662Q6ZS27 426 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 ARHGEF18Q6ZSZ5 1173 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 OTOP1Q7RTM1 612 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 PRRT2Q7Z6L0 340 aaPredicted RBP5.66□□□□□ -1.5
GPNMB-207ENST00000468723 DHX37Q8IY37 1157 aaKnown RBP5.66□□□□□ -1.5
GPNMB-207ENST00000468723 CDC42EP3Q9UKI2 254 aa5.66□□□□□ -1.5
GPNMB-207ENST00000468723 DVL2O14641 736 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 KPNA6O60684 536 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms