RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 LRCH2Q5VUJ6 765 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 TAF2Q6P1X5 1199 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 MTHFD1LQ6UB35 978 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 SEPT8Q92599 483 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 TEKT3Q9BXF9 490 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 DDX25Q9UHL0 483 aaKnown RBP13.06□□□□□ -0.32
CDHR3-205ENST00000468143 MAFBQ9Y5Q3 323 aaPredicted RBP13.06□□□□□ -0.32
CDHR3-205ENST00000468143 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 KIF28PB7ZC32 967 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 SLC37A4O43826 429 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 TLL1O43897 1013 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 HBP1O60381 514 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 GHRP10912 638 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 CYP3A7P24462 503 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 KRT2P35908 639 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 SLC26A2P50443 739 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 MGAT3Q09327 533 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 SMAP1Q8IYB5 467 aaPredicted RBP13.05□□□□□ -0.32
CDHR3-205ENST00000468143 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
CDHR3-205ENST00000468143 ATP8B4Q8TF62 1192 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 RIT2Q99578 217 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 DISC1Q9NRI5 854 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 PCDHA2Q9Y5H9 948 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 CDY2AQ9Y6F7 541 aa13.05□□□□□ -0.32
CDHR3-205ENST00000468143 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 TRIP12Q14669 1992 aaPredicted RBP13.04□□□□□ -0.32
CDHR3-205ENST00000468143 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 BTBD18B2RXH4 712 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 RFXAPO00287 272 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
CDHR3-205ENST00000468143 PSMD10O75832 226 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 MRPS6P82932 125 aaKnown RBP13.04□□□□□ -0.32
CDHR3-205ENST00000468143 GUCY1B3Q02153 619 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 LPIN1Q14693 890 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 UGCGQ16739 394 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 ZNF484Q5JVG2 852 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 KRT40Q6A162 431 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 MIER3Q7Z3K6 550 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 SPRED2Q7Z698 418 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 RPAINQ86UA6 219 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 MYOCDQ8IZQ8 938 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 MBOAT7Q96N66 472 aa13.04□□□□□ -0.32
CDHR3-205ENST00000468143 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 LCHNA4D1U4 455 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 ZBTB42B2RXF5 422 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 ZNF862O60290 1169 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 UPP2O95045 317 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 MMP1P03956 469 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 AMHP03971 560 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 IGFBP4P22692 258 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
CDHR3-205ENST00000468143 TRIM29Q14134 588 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 FBXO47Q5MNV8 452 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 IER5Q5VY09 327 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 MAFAQ8NHW3 353 aaPredicted RBP13.03□□□□□ -0.32
CDHR3-205ENST00000468143 ETNPPLQ8TBG4 499 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CDHR3-205ENST00000468143 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 PPP1R16BQ96T49 567 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 IFIH1Q9BYX4 1025 aaKnown RBP13.03□□□□□ -0.32
CDHR3-205ENST00000468143 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
CDHR3-205ENST00000468143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 M0QZ92 97 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 MARCH6O60337 910 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 EFCAB14O75071 495 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 GJB5O95377 273 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 CD52P31358 61 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 SFNP31947 248 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 JAK3P52333 1124 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 TAP1Q03518 808 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 ADGRE1Q14246 886 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 DIS3L2Q8IYB7 885 aaKnown RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 KIAA0319LQ8IZA0 1049 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 METTL13Q8N6R0 699 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 ARNTL2Q8WYA1 636 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 TNFRSF25Q93038 417 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 ZSCAN31Q96LW9 406 aaPredicted RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 GAS2L1Q99501 681 aaPredicted RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 CELF4Q9BZC1 486 aaKnown RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.33
CDHR3-205ENST00000468143 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 NRBP2Q9NSY0 501 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 TRPV2Q9Y5S1 764 aa13.02□□□□□ -0.33
CDHR3-205ENST00000468143 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 EML1O00423 815 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 C22orf31O95567 290 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 OATP04181 439 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms