RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 CCDC60Q8IWA6 550 aaPredicted RBP22.82■■□□□ 1.24
TMEM53-207ENST00000468117 FBXO16Q8IX29 292 aaPredicted RBP22.82■■□□□ 1.24
TMEM53-207ENST00000468117 EEF2KMTQ96G04 330 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 SRRTQ9BXP5 876 aaKnown RBP22.82■■□□□ 1.24
TMEM53-207ENST00000468117 KCND2Q9NZV8 630 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 ABT1Q9ULW3 272 aaKnown RBP22.82■■□□□ 1.24
TMEM53-207ENST00000468117 ARID2Q68CP9 1835 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 STRNO43815 780 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 LY6KQ17RY6 165 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 APTXQ7Z2E3 356 aaKnown RBP22.82■■□□□ 1.24
TMEM53-207ENST00000468117 GPR142Q7Z601 462 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 CSGALNACT2Q8N6G5 542 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 SMC1BQ8NDV3 1235 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 INTS13Q9NVM9 706 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 COL4A3BPQ9Y5P4 624 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 ZNF862O60290 1169 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 ARIH2O95376 493 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 TGFB3P10600 412 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 CASP5P51878 434 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 TAF1CQ15572 869 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-207ENST00000468117 PTPN21Q16825 1174 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 ZNF792Q3KQV3 632 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 CCDC144BQ3MJ40 725 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 CCDC186Q7Z3E2 898 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 IRF2BP1Q8IU81 584 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 CREBRFQ8IUR6 639 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 ABRAQ8N0Z2 381 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 MORC4Q8TE76 937 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 ZNF830Q96NB3 372 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-207ENST00000468117 FAM155AB1AL88 458 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-207ENST00000468117 FARP2O94887 1054 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-207ENST00000468117 FAM13AO94988 1023 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 PLA2G4FQ68DD2 849 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 MIS18BP1Q6P0N0 1132 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 SCFD1Q8WVM8 642 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 ATP6V0A1Q93050 837 aa22.81■■□□□ 1.24
TMEM53-207ENST00000468117 CCDC43Q96MW1 224 aaKnown RBP22.81■■□□□ 1.24
TMEM53-207ENST00000468117 SYNGAP1Q96PV0 1343 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 ASB14A6NK59 587 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 KCNJ18B7U540 433 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 ECM2O94769 699 aaPredicted RBP22.8■■□□□ 1.24
TMEM53-207ENST00000468117 SUPT20HL2P0C7V6 817 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 GUCY2CP25092 1073 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 KCNJ12Q14500 433 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 NEDD9Q14511 834 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 TCP11X2Q5H9J9 407 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 ANO5Q75V66 913 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 ARMCX2Q7L311 632 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 FILIP1Q7Z7B0 1213 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 IFNL1Q8IU54 200 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 ADGRA2Q96PE1 1338 aa22.8■■□□□ 1.24
TMEM53-207ENST00000468117 LOC102724159A0A0B4J2E5 919 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 BACH1O14867 736 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 GGPS1O95749 300 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 PTGS1P23219 599 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 NPEPPSP55786 919 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 PWP2Q15269 919 aaKnown RBP22.79■■□□□ 1.24
TMEM53-207ENST00000468117 MAEAQ7L5Y9 396 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 NELFCDQ8IXH7 590 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 MYCT1Q8N699 235 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 THAP9Q9H5L6 903 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 MRPL44Q9H9J2 332 aaKnown RBP22.79■■□□□ 1.24
TMEM53-207ENST00000468117 PARVGQ9HBI0 331 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 ZCCHC17Q9NP64 241 aaKnown RBP22.79■■□□□ 1.24
TMEM53-207ENST00000468117 DDX41Q9UJV9 622 aaKnown RBP22.79■■□□□ 1.24
TMEM53-207ENST00000468117 ODF2LQ9ULJ1 636 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 USO1O60763 962 aaKnown RBP22.79■■□□□ 1.24
TMEM53-207ENST00000468117 GAP43P17677 238 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 GRB14Q14449 540 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 KRT31Q15323 416 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 XKR9Q5GH70 373 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 TMC6Q7Z403 805 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 ANKEF1Q9NU02 776 aa22.79■■□□□ 1.24
TMEM53-207ENST00000468117 PCNTO95613 3336 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 A0A1B0GTH6 734 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 HIP1RO75146 1068 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 ATG7O95352 703 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 TPM3P06753 285 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 MYBP10242 640 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 MAPK4P31152 587 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 ZNF131P52739 623 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 SPAG1Q07617 926 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 PLEKHH3Q7Z736 793 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 DPP9Q86TI2 863 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 DAW1Q8N136 415 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 CTAGE1Q96RT6 745 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 OLFML3Q9NRN5 406 aa22.78■■□□□ 1.24
TMEM53-207ENST00000468117 LIMA1Q9UHB6 759 aaKnown RBP22.78■■□□□ 1.24
TMEM53-207ENST00000468117 STBD1O95210 358 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 LRRC63Q05C16 580 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 MAPK7Q13164 816 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 NR1I3Q14994 352 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 KCNV1Q6PIU1 500 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 CCDC102AQ96A19 550 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 MLXIPQ9HAP2 919 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 PDGFCQ9NRA1 345 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.77■■□□□ 1.24
TMEM53-207ENST00000468117 IGSF9BQ9UPX0 1349 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 GSTTP1A0A1W2PQM5 241 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 TMEM88BA6NKF7 163 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms