RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 NME8Q8N427 588 aa21.63■■□□□ 1.05
COL7A1-207ENST00000467985 ATP8B4Q8TF62 1192 aa21.63■■□□□ 1.05
COL7A1-207ENST00000467985 TOP1MTQ969P6 601 aa21.63■■□□□ 1.05
COL7A1-207ENST00000467985 LARP6Q9BRS8 491 aaKnown RBP21.63■■□□□ 1.05
COL7A1-207ENST00000467985 SQORQ9Y6N5 450 aa21.63■■□□□ 1.05
COL7A1-207ENST00000467985 COL1A2P08123 1366 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 SMIM35A0A1B0GVV1 85 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 LINC01553A4QN01 128 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 PSAPP07602 524 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 ERVK-21P61565 698 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 LPIN1Q14693 890 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 ZNF484Q5JVG2 852 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 FBXO47Q5MNV8 452 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 SWSAP1Q6NVH7 229 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 TSHZ1Q6ZSZ6 1077 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 CCDC60Q8IWA6 550 aaPredicted RBP21.62■■□□□ 1.05
COL7A1-207ENST00000467985 BLIDQ8IZY5 108 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 DAGLBQ8NCG7 672 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 ATXN2LQ8WWM7 1075 aaKnown RBP21.62■■□□□ 1.05
COL7A1-207ENST00000467985 SYMPKQ92797 1274 aaKnown RBP21.62■■□□□ 1.05
COL7A1-207ENST00000467985 LENG9Q96B70 501 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 COL25A1Q9BXS0 654 aaPredicted RBP21.62■■□□□ 1.05
COL7A1-207ENST00000467985 OSBPL7Q9BZF2 842 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 FAM49AQ9H0Q0 323 aaPredicted RBP21.62■■□□□ 1.05
COL7A1-207ENST00000467985 SLKQ9H2G2 1235 aaPredicted RBP21.62■■□□□ 1.05
COL7A1-207ENST00000467985 PCDHA10Q9Y5I2 948 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 MTCH2Q9Y6C9 303 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 CDY2AQ9Y6F7 541 aa21.62■■□□□ 1.05
COL7A1-207ENST00000467985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.61■■□□□ 1.05
COL7A1-207ENST00000467985 EPOPA6NHQ4 379 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 RFXAPO00287 272 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 MTHFD1LQ6UB35 978 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 FAM43BQ6ZT52 329 aaPredicted RBP21.61■■□□□ 1.05
COL7A1-207ENST00000467985 SP7Q8TDD2 431 aaPredicted RBP21.61■■□□□ 1.05
COL7A1-207ENST00000467985 TRAPPC12Q8WVT3 735 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 RIT2Q99578 217 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 LMCD1Q9NZU5 365 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 THEGQ9P2T0 379 aa21.61■■□□□ 1.05
COL7A1-207ENST00000467985 SIP14410 1827 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 PFKFB2O60825 505 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 XBP1P17861 261 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 CKAP2LQ8IYA6 745 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 MICALL1Q8N3F8 863 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 TBCKQ8TEA7 893 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 BBXQ8WY36 941 aaPredicted RBP21.6■■□□□ 1.05
COL7A1-207ENST00000467985 IL17RAQ96F46 866 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 YME1L1Q96TA2 773 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 SAMM50Q9Y512 469 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 MAFBQ9Y5Q3 323 aaPredicted RBP21.6■■□□□ 1.05
COL7A1-207ENST00000467985 TRPV2Q9Y5S1 764 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 BDP1A6H8Y1 2624 aa21.6■■□□□ 1.05
COL7A1-207ENST00000467985 PRRC2BQ5JSZ5 2229 aaKnown RBP21.6■■□□□ 1.05
COL7A1-207ENST00000467985 STK36Q9NRP7 1315 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 WDR64B1ANS9 1081 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 MSH4O15457 936 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 KLRC1P26715 233 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 SCRN1Q12765 414 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 GRB10Q13322 594 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 TJAP1Q5JTD0 557 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 ZBTB10Q96DT7 871 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 FAM167AQ96KS9 214 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 SAMD11Q96NU1 681 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 UIMC1Q96RL1 719 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 FTHL17Q9BXU8 183 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 TPCN1Q9ULQ1 816 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 MYH9P35579 1960 aaKnown RBP21.59■■□□□ 1.05
COL7A1-207ENST00000467985 COL4A6Q14031 1691 aa21.59■■□□□ 1.05
COL7A1-207ENST00000467985 KDM3AQ9Y4C1 1321 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 CYP3A7-CYP3A51PA0A087WV96 503 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 M0R2N6 131 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 GAS7O60861 476 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 UPP2O95045 317 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 CYP3A7P24462 503 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 SFNP31947 248 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 Q4G0T1 1027 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 KRT25Q7Z3Z0 450 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 SLC5A5Q92911 643 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 CELF4Q9BZC1 486 aaKnown RBP21.58■■□□□ 1.05
COL7A1-207ENST00000467985 PRDM6Q9NQX0 595 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 CEP131Q9UPN4 1083 aa21.58■■□□□ 1.05
COL7A1-207ENST00000467985 COL4A4P53420 1690 aaPredicted RBP21.57■■□□□ 1.04
COL7A1-207ENST00000467985 LPXNO60711 386 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 JAK3P52333 1124 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 MRPS5P82675 430 aaKnown RBP21.57■■□□□ 1.04
COL7A1-207ENST00000467985 NONOQ15233 471 aaKnown RBP eCLIP21.57■■□□□ 1.04
COL7A1-207ENST00000467985 LRCH2Q5VUJ6 765 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 MOXD1Q6UVY6 613 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 SPRED2Q7Z698 418 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 WASF1Q92558 559 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 TEKT3Q9BXF9 490 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 DISC1Q9NRI5 854 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 GABBR1Q9UBS5 961 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 MTUS1Q9ULD2 1270 aa21.57■■□□□ 1.04
COL7A1-207ENST00000467985 IGSF9BQ9UPX0 1349 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 MUC3AQ02505 3323 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 ZBTB42B2RXF5 422 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 ENPP3O14638 875 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 EDIL3O43854 480 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 ATP4AP20648 1035 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 CD52P31358 61 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms