RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 TUBE1Q9UJT0 475 aa11.79□□□□□ -0.52
SSR3-205ENST00000467789 INSL6Q9Y581 213 aa11.79□□□□□ -0.52
SSR3-205ENST00000467789 CPLX1O14810 134 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 ARP10275 920 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 IGFBP4P22692 258 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 STAT5BP51692 787 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 ACTR2P61160 394 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 DEFB103AP81534 67 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 TAP1Q03518 808 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 TOB2Q14106 344 aaPredicted RBP11.78□□□□□ -0.52
SSR3-205ENST00000467789 ADGRE1Q14246 886 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 JAKMIP3Q5VZ66 844 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 CYP2W1Q8TAV3 490 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 PHKBQ93100 1093 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 PGBD1Q96JS3 809 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 SLC26A6Q9BXS9 759 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 TCEAL9Q9UHQ7 104 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 SQORQ9Y6N5 450 aa11.78□□□□□ -0.52
SSR3-205ENST00000467789 IGLV3-22A0A075B6J6 115 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 IGKV6D-21A0A0A0MT36 114 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 FAM86B1E9PN63 330 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
SSR3-205ENST00000467789 DEXIO95424 95 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 CTSHP09668 335 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 FAM86B2P0C5J1 330 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 MARK3P27448 753 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 CIITAP33076 1130 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 ANAPC15P60006 121 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 SSRP1Q08945 709 aaKnown RBP11.77□□□□□ -0.53
SSR3-205ENST00000467789 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.53
SSR3-205ENST00000467789 FAM160B1Q5W0V3 765 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 USP38Q8NB14 1042 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.53
SSR3-205ENST00000467789 PCYT2Q99447 389 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 IFIH1Q9BYX4 1025 aaKnown RBP11.77□□□□□ -0.53
SSR3-205ENST00000467789 LMCD1Q9NZU5 365 aa11.77□□□□□ -0.53
SSR3-205ENST00000467789 COL4A6Q14031 1691 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 M0QZ92 97 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 HBP1O60381 514 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 CDKL5O76039 1030 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 INSRRP14616 1297 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 USP11P51784 963 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 HTRA4P83105 476 aaPredicted RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 KRT76Q01546 638 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 PLCB4Q15147 1175 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 TCTN1Q2MV58 587 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 MARCH8Q5T0T0 291 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 IER5Q5VY09 327 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 GALNT17Q6IS24 598 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 ZNF746Q6NUN9 644 aaPredicted RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 SMAP1Q8IYB5 467 aaPredicted RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 NME8Q8N427 588 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 TOP1MTQ969P6 601 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 SAMD11Q96NU1 681 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 NCOA5Q9HCD5 579 aaKnown RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 PDRG1Q9NUG6 133 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 PCDHA2Q9Y5H9 948 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 COL1A2P08123 1366 aa11.76□□□□□ -0.53
SSR3-205ENST00000467789 MYH9P35579 1960 aaKnown RBP11.76□□□□□ -0.53
SSR3-205ENST00000467789 SIP14410 1827 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 SMIM35A0A1B0GVV1 85 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 CHRNA1P02708 482 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 CENPBP07199 599 aaPredicted RBP11.75□□□□□ -0.53
SSR3-205ENST00000467789 NLRP5P59047 1200 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 ERVK-21P61565 698 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 MGAT3Q09327 533 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 TJAP1Q5JTD0 557 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 MIS18BP1Q6P0N0 1132 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 UPF3BQ9BZI7 483 aaKnown RBP11.75□□□□□ -0.53
SSR3-205ENST00000467789 VPS54Q9P1Q0 977 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 THEGQ9P2T0 379 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
SSR3-205ENST00000467789 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 BACH1O14867 736 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 CCNE2O96020 404 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 PSAPP07602 524 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 XBP1P17861 261 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 IGBP1P78318 339 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 MRPS6P82932 125 aaKnown RBP11.74□□□□□ -0.53
SSR3-205ENST00000467789 AAK1Q2M2I8 961 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 PRR16Q569H4 304 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 ZNF484Q5JVG2 852 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 FBXO47Q5MNV8 452 aa11.74□□□□□ -0.53
SSR3-205ENST00000467789 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.538e-7■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms