RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 USP8P40818 1118 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 MRPL12P52815 198 aaKnown RBP16.32■□□□□ 0.2
RRP1-201ENST00000467112 ZNF543Q08ER8 600 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 ARFGAP2Q8N6H7 521 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
RRP1-201ENST00000467112 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■□□□ 12.1
RRP1-201ENST00000467112 FAM170AA1A519 330 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 UFL1O94874 794 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 PLCG2P16885 1265 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 GPSM2P81274 684 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 C10orf76Q5T2E6 689 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 KCTD1Q719H9 257 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 PEX26Q7Z412 305 aa16.32■□□□□ 0.2
RRP1-201ENST00000467112 CELF4Q9BZC1 486 aaKnown RBP16.32■□□□□ 0.2
RRP1-201ENST00000467112 DCDC2CA8MYV0 355 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 AFPP02771 609 aaKnown RBP16.31■□□□□ 0.2
RRP1-201ENST00000467112 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 GJB7Q6PEY0 223 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 CNOT8Q9UFF9 292 aaKnown RBP16.31■□□□□ 0.2
RRP1-201ENST00000467112 MEIS1O00470 390 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 TTI1O43156 1089 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 RFC4P35249 363 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 SLC12A3P55017 1021 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 PSMC6P62333 389 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
RRP1-201ENST00000467112 QPCTQ16769 361 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 C6orf89Q6UWU4 347 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 CCDC13Q8IYE1 715 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
RRP1-201ENST00000467112 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 CALR3Q96L12 384 aaKnown RBP16.31■□□□□ 0.2
RRP1-201ENST00000467112 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
RRP1-201ENST00000467112 LRRC4CQ9HCJ2 640 aa16.31■□□□□ 0.2
RRP1-201ENST00000467112 GMNCA6NCL1 334 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 AKAP3O75969 853 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 HOXD13P35453 343 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 NCAPGQ9BPX3 1015 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 NOVA2Q9UNW9 492 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 FLOT1O75955 427 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 ACTN3Q08043 901 aaPredicted RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.26e-8■■■■□ 19.8
RRP1-201ENST00000467112 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 DAAM2Q86T65 1068 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 DPH5Q9H2P9 285 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 BZW2Q9Y6E2 419 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
RRP1-201ENST00000467112 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
RRP1-201ENST00000467112 SPRED3Q2MJR0 410 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 SFR1Q86XK3 245 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 GPATCH11Q8N954 259 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 TRIM31Q9BZY9 425 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 BHMG1C9JSJ3 638 aaPredicted RBP16.29■□□□□ 0.2
RRP1-201ENST00000467112 ZBTB5O15062 677 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 RGL2O15211 777 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 TRAPPC3O43617 180 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 TTLL1O95922 423 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 H2AFZP0C0S5 128 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 CASP4P49662 377 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 KNOP1Q1ED39 458 aaKnown RBP16.29■□□□□ 0.2
RRP1-201ENST00000467112 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 H2AFVQ71UI9 128 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 IGKV6D-41A0A0C4DH26 115 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 DDX3XO00571 662 aaKnown RBP eCLIP16.29■□□□□ 0.2
RRP1-201ENST00000467112 GABPAQ06546 454 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 BIRC3Q13489 604 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 GIT2Q14161 759 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 CATSPER3Q86XQ3 398 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
RRP1-201ENST00000467112 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 KCNMB3Q9NPA1 279 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 TRAF3IP3Q9Y228 551 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
RRP1-201ENST00000467112 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
RRP1-201ENST00000467112 CCDC188H7C350 402 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 RAD21O60216 631 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 PRKCIP41743 596 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 MAGOHP61326 146 aaKnown RBP16.28■□□□□ 0.2
RRP1-201ENST00000467112 PPP2R2AP63151 447 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 DHX9Q08211 1270 aaKnown RBP16.28■□□□□ 0.2
RRP1-201ENST00000467112 EPHA7Q15375 998 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 CCDC91Q7Z6B0 441 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 NT5DC3Q86UY8 548 aa16.28■□□□□ 0.2
RRP1-201ENST00000467112 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms