RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 DBPQ10586 325 aaPredicted RBP6.52□□□□□ -1.37
XRN1-206ENST00000467077 RSPO2Q6UXX9 243 aaPredicted RBP6.52□□□□□ -1.37
XRN1-206ENST00000467077 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
XRN1-206ENST00000467077 OTOP2Q7RTS6 562 aa6.52□□□□□ -1.37
XRN1-206ENST00000467077 FAM178BQ8IXR5 827 aa6.52□□□□□ -1.37
XRN1-206ENST00000467077 RTKN2Q8IZC4 609 aa6.52□□□□□ -1.37
XRN1-206ENST00000467077 OR10A2Q9H208 303 aa6.52□□□□□ -1.37
XRN1-206ENST00000467077 NKRFO15226 690 aaKnown RBP eCLIP6.51□□□□□ -1.37
XRN1-206ENST00000467077 MSCO60682 206 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 ZKSCAN2Q63HK3 967 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
XRN1-206ENST00000467077 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 ANKRD35Q8N283 1001 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 SHCBP1Q8NEM2 672 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 OR14K1Q8NGZ2 314 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 ZNF764Q96H86 408 aaPredicted RBP6.51□□□□□ -1.37
XRN1-206ENST00000467077 NRDE2Q9H7Z3 1164 aa6.51□□□□□ -1.37
XRN1-206ENST00000467077 ACOT7O00154 380 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 MASP2O00187 686 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 SLC26A4O43511 780 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 GCP02774 474 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 PDIA4P13667 645 aaKnown RBP6.5□□□□□ -1.37
XRN1-206ENST00000467077 GJA8P48165 433 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 CNGB1Q14028 1251 aaPredicted RBP6.5□□□□□ -1.37
XRN1-206ENST00000467077 LARP4Q71RC2 724 aaKnown RBP eCLIP6.5□□□□□ -1.37
XRN1-206ENST00000467077 CXXC5Q7LFL8 322 aaKnown RBP6.5□□□□□ -1.37
XRN1-206ENST00000467077 FILIP1Q7Z7B0 1213 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 SEC16BQ96JE7 1060 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 MPHOSPH9Q99550 1183 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 RIOX1Q9H6W3 641 aa6.5□□□□□ -1.37
XRN1-206ENST00000467077 MRE11P49959 708 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 IL13RA1P78552 427 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 PCOLCEQ15113 449 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 WDR48Q8TAF3 677 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 ADARB2Q9NS39 739 aaKnown RBP6.49□□□□□ -1.37
XRN1-206ENST00000467077 ACTR10Q9NZ32 417 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 ZNHIT2Q9UHR6 403 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 FAM184BQ9ULE4 1060 aa6.49□□□□□ -1.37
XRN1-206ENST00000467077 B2RBV5 119 aa6.48□□□□□ -1.37
XRN1-206ENST00000467077 LMNAP02545 664 aaKnown RBP6.48□□□□□ -1.37
XRN1-206ENST00000467077 ZNF16P17020 682 aaPredicted RBP6.48□□□□□ -1.37
XRN1-206ENST00000467077 HABP4Q5JVS0 413 aaKnown RBP6.48□□□□□ -1.37
XRN1-206ENST00000467077 IER2Q9BTL4 223 aa6.48□□□□□ -1.37
XRN1-206ENST00000467077 CD244Q9BZW8 370 aa6.48□□□□□ -1.37
XRN1-206ENST00000467077 RIC8BQ9NVN3 520 aa6.48□□□□□ -1.37
XRN1-206ENST00000467077 CDC42EP3Q9UKI2 254 aa6.48□□□□□ -1.37
XRN1-206ENST00000467077 FAM47E-STBD1D6RA91 191 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 DDAH1O94760 285 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 PTGS1P23219 599 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 EIF4HQ15056 248 aaKnown RBP6.47□□□□□ -1.37
XRN1-206ENST00000467077 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 SPTY2D1Q68D10 685 aaPredicted RBP6.47□□□□□ -1.37
XRN1-206ENST00000467077 SYCE2Q6PIF2 218 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 LBX2Q6XYB7 198 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 INCENPQ9NQS7 918 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 GPRC5BQ9NZH0 403 aa6.47□□□□□ -1.37
XRN1-206ENST00000467077 SCAMP3O14828 347 aaKnown RBP6.46□□□□□ -1.38
XRN1-206ENST00000467077 GJA4P35212 333 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 C21orf58P58505 322 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 PPP2R2AP63151 447 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 GLCCI1Q86VQ1 547 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 PRIMA1Q86XR5 153 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 HAS1Q92839 578 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 ZFYVE21Q9BQ24 234 aa6.46□□□□□ -1.38
XRN1-206ENST00000467077 GZF1Q9H116 711 aaPredicted RBP6.46□□□□□ -1.38
XRN1-206ENST00000467077 HECAQ9UBI9 543 aaPredicted RBP6.46□□□□□ -1.38
XRN1-206ENST00000467077 A0A1W2PRX2 142 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 PMS2P1A4D2B8 440 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 SOD2P04179 222 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 PTPN1P18031 435 aaKnown RBP6.45□□□□□ -1.38
XRN1-206ENST00000467077 GRIA2P42262 883 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 MAN2A2P49641 1150 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 RIN1Q13671 783 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 TNNI3KQ59H18 835 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 EEPD1Q7L9B9 569 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 NLGN4XQ8N0W4 816 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 SYNE4Q8N205 404 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 DCAF4Q8WV16 495 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 EPN3Q9H201 632 aa6.45□□□□□ -1.38
XRN1-206ENST00000467077 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.45□□□□□ -1.38
XRN1-206ENST00000467077 A0A0G2JNJ9 132 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.44□□□□□ -1.38
XRN1-206ENST00000467077 TRAF5O00463 557 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 SMAD7O15105 426 aaKnown RBP6.44□□□□□ -1.38
XRN1-206ENST00000467077 ERBB2P04626 1255 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 SLC25A3Q00325 362 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 MBNL2Q5VZF2 373 aaKnown RBP6.44□□□□□ -1.38
XRN1-206ENST00000467077 TRIM68Q6AZZ1 485 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 EP400NLQ6ZTU2 488 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 GPR150Q8NGU9 434 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 MIEF2Q96C03 454 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 ALG1Q9BT22 464 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 GALNT8Q9NY28 637 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 Q9UFV3 132 aa6.44□□□□□ -1.38
XRN1-206ENST00000467077 A0A0A6YYK5 440 aaPredicted RBP6.43□□□□□ -1.38
XRN1-206ENST00000467077 PROZP22891 400 aa6.43□□□□□ -1.38
XRN1-206ENST00000467077 KRTAP10-11P60412 298 aa6.43□□□□□ -1.38
XRN1-206ENST00000467077 GPR85P60893 370 aa6.43□□□□□ -1.38
XRN1-206ENST00000467077 HGFACQ04756 655 aa6.43□□□□□ -1.38
XRN1-206ENST00000467077 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms